RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 TRMT1LQ7Z2T5 733 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 ALYREFQ86V81 257 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 MCPH1Q8NEM0 835 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 RAB3IL1Q8TBN0 382 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 MTBPQ96DY7 904 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 LBHD1Q9BQE6 289 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNF518BQ9C0D4 1074 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 DBNDD1Q9H9R9 158 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 SORCS3Q9UPU3 1222 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 COMMD3-BMI1R4GMX3 469 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 IRF6O14896 467 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 DKC1O60832 514 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 VNN1O95497 513 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 NPR1P16066 1061 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 LIG4P49917 911 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 MRPS9P82933 396 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 FAAP100Q0VG06 881 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 HNRNPDQ14103 355 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 CNPY1Q3B7I2 92 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 LGSNQ5TDP6 509 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 TTC39BQ5VTQ0 682 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 ANO5Q75V66 913 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 THNSL1Q8IYQ7 743 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 TMEM35BQ8NCS4 154 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 EZH1Q92800 747 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 PANX3Q96QZ0 392 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 EPAS1Q99814 870 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 TDRD3Q9H7E2 651 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 APOBEC3GQ9HC16 384 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 MAP3K20Q9NYL2 800 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 TCRBV9S1A1TA0A576 114 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 KRT37O76014 449 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 ZCCHC18P0CG32 403 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 CPA2P48052 419 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 LMBRD2Q68DH5 695 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 TXNRD3NBQ6F5E7 133 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 ACAD11Q709F0 780 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 SLC26A11Q86WA9 606 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 CEP170P1Q96L14 293 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 SRPK1Q96SB4 655 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 THTPAQ9BU02 230 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 MIS12Q9H081 205 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 ZDHHC7Q9NXF8 308 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 CHMP2BQ9UQN3 213 aa15.46■□□□□ 0.07
CACNA1A-220ENST00000635988 C2orf71A6NGG8 1288 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 CST8O60676 142 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 PIAS1O75925 651 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 TMEM63AO94886 807 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 GDF10P55107 478 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 OGDHQ02218 1023 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 CDC16Q13042 620 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 HADHQ16836 314 aaKnown RBP15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 KBTBD12Q3ZCT8 623 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 LRRC23Q53EV4 343 aaPredicted RBP15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 TREML1Q86YW5 311 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 STKLD1Q8NE28 680 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 E2F7Q96AV8 911 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 TUBGCP5Q96RT8 1024 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 PNPLA8Q9NP80 782 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 SLC7A8Q9UHI5 535 aa15.46■□□□□ 0.06
CACNA1A-220ENST00000635988 C3orf70A6NLC5 250 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 DGAT1O75907 488 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 BAG2O95816 211 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 ELK3P41970 407 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 ZNF132P52740 706 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 TMPRSS15P98073 1019 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 XIAPP98170 497 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 CBLBQ13191 982 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 RFX8Q6ZV50 586 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 MARK2Q7KZI7 788 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 CRLF3Q8IUI8 442 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 NME8Q8N427 588 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 B4GALNT2Q8NHY0 566 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 HAPLN3Q96S86 360 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 TTC1Q99614 292 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 NRXN2Q9P2S2 1712 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 ZNF180Q9UJW8 692 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 AGO2Q9UKV8 859 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 LDHAP00338 332 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 SNRPAP09012 282 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 STIP1P31948 543 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 DYNLT1P63172 113 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 PRPF39Q86UA1 669 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 PIP4K2CQ8TBX8 421 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 ACSF2Q96CM8 615 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 FAM84AQ96KN4 292 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 DDX50Q9BQ39 737 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 SIKE1Q9BRV8 207 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 FRMD8Q9BZ67 464 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 IMPG2Q9BZV3 1241 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 MKS1Q9NXB0 559 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 ARHGAP28Q9P2N2 729 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 TBC1D30Q9Y2I9 924 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms