RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 UPP1Q16831 310 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 WSCD1Q658N2 575 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CD300LGQ6UXG3 332 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 TMC3Q7Z5M5 1100 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 TET1Q8NFU7 2136 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 PEBP4Q96S96 227 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 RASAL2Q9UJF2 1139 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SNX24Q9Y343 169 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 PIK3R2O00459 728 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CYB561D2O14569 222 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 PPFIA2O75334 1257 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 ECEL1O95672 775 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 KRT1P04264 644 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CKBP12277 381 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 MIPP30301 263 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 GJC1P36383 396 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SCNN1AP37088 669 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 BCAT1P54687 386 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SLC6A3Q01959 620 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 GABPB1Q06547 395 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 CCDC142Q17RM4 750 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 RAB6CQ53S08 254 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 ARCQ7LC44 396 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 RXFP2Q8WXD0 754 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SENP8Q96LD8 212 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 B3GNT5Q9BYG0 378 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
CACNA1A-219ENST00000635917 NLRC5Q86WI3 1866 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 A0A1W2PQ45 241 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 A0A1W2PQY0 241 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ATP2C2O75185 946 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 KRT7P08729 469 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 GPD1P21695 349 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 RPL9P32969 192 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ARSEP51690 589 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SNX1Q13596 522 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 PTK6Q13882 451 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 CCDC14Q49A88 953 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SYDE1Q6ZW31 735 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SLC26A9Q7LBE3 791 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 RTN4RL1Q86UN2 441 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 SLC2A14Q8TDB8 520 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ART4Q93070 314 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 HSFY1Q96LI6 401 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 FMO2Q99518 471 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 ADAM2Q99965 735 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 EPB41L4BQ9H329 900 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 USP18Q9UMW8 372 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
CACNA1A-219ENST00000635917 LIASO43766 372 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 TJP3O95049 919 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 PDGFRAP16234 1089 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 KDELR1P24390 212 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 GBP1P32455 592 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 HSD17B3P37058 310 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 KRT17Q04695 432 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 TERF2Q15554 542 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 C15orf59Q2T9L4 293 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 SMTNL2Q2TAL5 461 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 KCNT1Q5JUK3 1230 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 RHBDF2Q6PJF5 856 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM129AQ9BZQ8 928 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms