RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 LRRC49Q8IUZ0 686 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ARHGAP18Q8N392 663 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 OR5B17Q8NGF7 314 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ANKRD27Q96NW4 1050 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 EPAS1Q99814 870 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 BCO2Q9BYV7 579 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MYH6P13533 1939 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MDM4O15151 490 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 CHADO15335 359 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PTPN9P43378 593 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF132P52740 706 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 STRADAQ7RTN6 431 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 C18orf25Q96B23 403 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 RSRC1Q96IZ7 334 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 UROC1Q96N76 676 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PIN4Q9Y237 131 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 COPEO14579 308 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ATMINO43313 823 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 CXCL8P10145 99 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 KDELR1P24390 212 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 GNL1P36915 607 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 HADHAP40939 763 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 C1orf220Q5T0J3 134 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TWF2Q6IBS0 349 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PLEKHO2Q8TD55 490 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 KLHL29Q96CT2 875 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SEC16BQ96JE7 1060 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 USP18Q9UMW8 372 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FGFR4P22455 802 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SNCBQ16143 134 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PRAMEF18Q5VWM3 479 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FAM49AQ9H0Q0 323 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TRABDQ9H4I3 376 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TMEM120BA0PK00 339 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 LACTBL1A8MY62 500 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FSBPO95073 299 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MRPS25P82663 173 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 INCA1Q0VD86 236 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 HSDL1Q3SXM5 330 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SH2D3CQ8N5H7 860 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SEMA4AQ9H3S1 761 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 METTL5Q9NRN9 209 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 NINJ2Q9NZG7 142 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ADGRA2Q96PE1 1338 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MAGEB16A2A368 324 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TMEM150BA6NC51 233 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 C5orf60A6NFR6 353 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ADM5C9JUS6 153 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SNUPNO95149 360 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TFRCP02786 760 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PGK2P07205 417 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SNRPAP09012 282 aaKnown RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MLNP12872 115 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF200P98182 395 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 LDLRAD1Q5T700 205 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 HIBCHQ6NVY1 386 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 LZTR1Q8N653 840 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MCRS1Q96EZ8 462 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SLC9A7Q96T83 725 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 LTBP1Q14766 1721 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ADGRA3Q8IWK6 1321 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 DNAJC25-GNG10A0A024R161 153 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CCT8L1PA6NM43 557 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CRYBB1P53674 252 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MAP2K5Q13163 448 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 GOLGA7BQ2TAP0 167 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 WDR75Q8IWA0 830 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PCSK9Q8NBP7 692 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ACTL9Q8TC94 416 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 HINFPQ9BQA5 517 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 AJAP1Q9UKB5 411 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 GOLGA8CPA6NN73 597 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TNPO2O14787 897 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC22O60826 627 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CIB2O75838 187 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 VNN1O95497 513 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SLC2A3P11169 496 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PROZP22891 400 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 OTUD4Q01804 1114 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 AUHQ13825 339 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TRIP13Q15645 432 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ILDR2Q71H61 639 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SLC26A11Q86WA9 606 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 DCP1BQ8IZD4 617 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CEP120Q8N960 986 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 RAB3IL1Q8TBN0 382 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ZBTB45Q96K62 511 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TGS1Q96RS0 853 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TSPAN16Q9UKR8 245 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 KPNA7A9QM74 516 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SLCO1A2P46721 670 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 KCNJ1P48048 391 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 UAP1Q16222 522 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CFAP157Q5JU67 520 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms