RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 FNIP1Q8TF40 1166 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 TMEM209Q96SK2 561 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 HERPUD2Q9BSE4 406 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 MED10Q9BTT4 135 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 DUSP16Q9BY84 665 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 MIS12Q9H081 205 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 NRDE2Q9H7Z3 1164 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 TMEM39AQ9NV64 488 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 TMEM30AQ9NV96 361 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 KLHL11Q9NVR0 708 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 KANSL3Q9P2N6 904 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
CACNA1A-216ENST00000635742 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 LRCH4O75427 683 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PARNO95453 639 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 LCP1P13796 627 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 TYMPP19971 482 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PCSK1P29120 753 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 CLCN6P51797 869 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 CACNA2D1P54289 1103 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 BCAR1P56945 870 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC6A3Q01959 620 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 LLGL1Q15334 1064 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 OVOS1Q6IE37 1185 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 C8orf74Q6P047 294 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ANKS1BQ7Z6G8 1248 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 METTL23Q86XA0 190 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC13A5Q86YT5 568 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 NPAS4Q8IUM7 802 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SCUBE3Q8IX30 993 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SPATA18Q8TC71 538 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 MYLPFQ96A32 169 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ACSF2Q96CM8 615 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 FAM193BQ96PV7 902 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PKMYT1Q99640 499 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RHOBTB2Q9BYZ6 727 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 DDX47Q9H0S4 455 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PLEKHA4Q9H4M7 779 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 TMLHEQ9NVH6 421 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 LCMT1Q9UIC8 334 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 DSEQ9UL01 958 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RAB21Q9UL25 225 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PATJQ8NI35 1801 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 CCDC188H7C350 402 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RAD51CO43502 376 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ZMYND10O75800 440 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 FAM200BP0CF97 657 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 GPD1P21695 349 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 PAX3P23760 479 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ITGB8P26012 769 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 CTCFP49711 727 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 MAP3K7CLP57077 242 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC25A11Q02978 314 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SIX1Q15475 284 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 KCTD19Q17RG1 926 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RAB6CQ53S08 254 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 KATNAL2Q8IYT4 538 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ZMIZ2Q8NF64 920 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 MYCBPAPQ8TBZ2 947 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RXFP2Q8WXD0 754 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SMOQ99835 787 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 HINFPQ9BQA5 517 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 ACBD6Q9BR61 282 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 RAB6CQ9H0N0 254 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 CYLDQ9NQC7 956 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 MARCH5Q9NX47 278 aa10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
CACNA1A-216ENST00000635742 TARSL2A2RTX5 802 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 TBKBP1A7MCY6 615 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 DPYSL4O14531 572 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 NRP1O14786 923 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 AP1G2O75843 785 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 KRT1P04264 644 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 IL1R2P27930 398 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 ACADSBP45954 432 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC11A1P49279 550 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 C15orf59Q2T9L4 293 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 SH3PXD2AQ5TCZ1 1133 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 FAM171BQ6P995 826 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 CNKSR3Q6P9H4 555 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 SLC26A9Q7LBE3 791 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 LRRTM3Q86VH5 581 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 NAP1L3Q99457 506 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 KIAA0100Q14667 2235 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-216ENST00000635742 TRIM43BA6NCK2 446 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 ZSCAN5CA6NGD5 496 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 HOXA2O43364 376 aa10.48□□□□□ -0.73
CACNA1A-216ENST00000635742 SEC31AO94979 1220 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms