RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 ZNF236Q9UL36 1845 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 CITO14578 2027 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 HCRTO43612 131 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 TCEA3O75764 348 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 MAGEA9P43362 315 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 IFNAR2P48551 515 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 LIG3P49916 1009 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 GAD2Q05329 585 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 IFT88Q13099 833 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 SLC27A1Q6PCB7 646 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 C6orf89Q6UWU4 347 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 VSTM1Q6UX27 236 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 ACOT1Q86TX2 421 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 NT5DC4Q86YG4 428 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 KCTD6Q8NC69 237 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 CMASQ8NFW8 434 aaPredicted RBP13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 FLRT1Q9NZU1 646 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 TBK1Q9UHD2 729 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 EFR3BQ9Y2G0 817 aa13.06□□□□□ -0.32
UBASH3A-209ENST00000635325 SCN1AP35498 2009 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 DNAH12Q6ZR08 3092 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 TMEM120BA0PK00 339 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 A6NJR5 290 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 C2CD4BA6NLJ0 364 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 LRRC14Q15048 493 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 CCDC142Q17RM4 750 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 CPLX4Q7Z7G2 160 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 TTC30AQ86WT1 665 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 SPATS2Q86XZ4 545 aaKnown RBP13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 TAB3Q8N5C8 712 aaPredicted RBP13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 MGARPQ8TDB4 240 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 SEC16BQ96JE7 1060 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
UBASH3A-209ENST00000635325 RRN3P2A6NIE6 340 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 GOLGA8MH3BSY2 632 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 BANF1O75531 89 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 GABBR2O75899 941 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 RNF8O76064 485 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 F2P00734 622 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 AKAP5P24588 427 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 NRLP54845 237 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 MPP2Q14168 576 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 FAM182AQ5T1J6 154 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 OLFML2BQ68BL8 750 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 PRCCQ92733 491 aaPredicted RBP13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 GNEQ9Y223 722 aaKnown RBP13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 KAT6AQ92794 2004 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 KIAA0754O94854 1291 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CYP2C9P11712 490 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 DARSP14868 501 aaKnown RBP13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 GPD1P21695 349 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 GCAP28676 217 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 PCK1P35558 622 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 SF3A3Q12874 501 aaKnown RBP eCLIP13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 NOGQ13253 232 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CRHR2Q13324 411 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CDO1Q16878 200 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 PKDCCQ504Y2 493 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 MORN1Q5T089 497 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 UNC45BQ8IWX7 931 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 DPEP3Q9H4B8 488 aa13.04□□□□□ -0.32
UBASH3A-209ENST00000635325 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms