RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CCNIQ14094 377 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 GALEQ14376 348 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 NPY5RQ15761 445 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ZIK1Q3SY52 487 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 CERCAMQ5T4B2 595 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 RGS7BPQ6MZT1 257 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 RD3Q7Z3Z2 195 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ZNF804AQ7Z570 1209 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 WDR75Q8IWA0 830 aaKnown RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ABRAQ8N0Z2 381 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 BOLLQ8N9W6 283 aaKnown RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 SMCR8Q8TEV9 937 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 FBXO41Q8TF61 875 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ATG4AQ8WYN0 398 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ZNF764Q96H86 408 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-223ENST00000628857 SARGQ9BW04 601 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 ZCWPW1Q9H0M4 648 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 R3HDMLQ9H3Y0 253 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 CXorf36Q9H7Y0 433 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 GLOD4Q9HC38 313 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 CPNE7Q9UBL6 633 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 SERTAD3Q9UJW9 196 aa3.72□□□□□ -1.81
CNOT1-223ENST00000628857 POLR2AP24928 1970 aaKnown RBP3.71□□□□□ -1.82
CNOT1-223ENST00000628857 A1L4Q6 167 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 AQP7P3A6NL99 342 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 JTBO76095 146 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 TRIM27P14373 513 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 JUPP14923 745 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 NDUFB7P17568 137 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 CCT8P50990 548 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 TREML2Q5T2D2 321 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DCAF12L1Q5VU92 463 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 KIAA1614Q5VZ46 1190 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 PPP4R4Q6NUP7 873 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DPY19L2P1Q6NXN4 242 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 CEP85Q6P2H3 762 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 MZT2AQ6P582 158 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 MAVSQ7Z434 540 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 SESTD1Q86VW0 696 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF280BQ86YH2 543 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 YAF2Q8IY57 180 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 IZUMO1Q8IYV9 350 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 OR56A3Q8NH54 315 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 BPIFB1Q8TDL5 484 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 OSCP1Q8WVF1 389 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 PPP2R3CQ969Q6 453 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF668Q96K58 619 aaPredicted RBP3.71□□□□□ -1.82
CNOT1-223ENST00000628857 COLEC11Q9BWP8 271 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 KLK15Q9H2R5 256 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 SACM1LQ9NTJ5 587 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DLL3Q9NYJ7 618 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 PTGFRNQ9P2B2 879 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DNMT3BQ9UBC3 853 aaKnown RBP3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DKK3Q9UBP4 350 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 DKK4Q9UBT3 224 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 CDY1Q9Y6F8 540 aa3.71□□□□□ -1.82
CNOT1-223ENST00000628857 hCG_1984214I3L0E3 225 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 AREL1O15033 823 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 MAP4K4O95819 1239 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 MYCLP12524 364 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 ZKSCAN1P17029 563 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 BTF3P20290 206 aaKnown RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 DRD4P21917 467 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 EPHA3P29320 983 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 PRKAR1BP31321 381 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 LIPAP38571 399 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 TIAL1Q01085 375 aaKnown RBP eCLIP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 ARHGEF7Q14155 803 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 SLC29A2Q14542 456 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF750Q32MQ0 723 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 C4orf46Q504U0 113 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 AKNAD1Q5T1N1 836 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 COL23A1Q86Y22 540 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 SPARTQ8N0X7 666 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 CNPY4Q8N129 248 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 MPP5Q8N3R9 675 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 GLG1Q92896 1179 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 ZDHHC12Q96GR4 267 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 THAP7Q9BT49 309 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 BRIP1Q9BX63 1249 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 FSD1LQ9BXM9 530 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 CHST8Q9H2A9 424 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 DUSP22Q9NRW4 184 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 MRPS17Q9Y2R5 130 aaKnown RBP3.7□□□□□ -1.82
CNOT1-223ENST00000628857 WNT6Q9Y6F9 365 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 AOX1Q06278 1338 aa3.7□□□□□ -1.82
CNOT1-223ENST00000628857 ANO9A1A5B4 782 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 TARM1B6A8C7 271 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 OVOL3O00110 214 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 CD3EAPO15446 510 aaKnown RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 IL18RAPO95256 599 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 MT-ND5P03915 603 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 IL1R2P27930 398 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 CPT1AP50416 773 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 PRKAG1P54619 331 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 EEFSECP57772 596 aaKnown RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 RPS16P62249 146 aaKnown RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 CCDC142Q17RM4 750 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 HSP90AB2PQ58FF8 381 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms