RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 PCSK1P29120 753 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
CNOT9-209ENST00000627282 WHAMMP3Q1A5X7 153 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 INTS6LQ5JSJ4 861 aaKnown RBP20.27■□□□□ 0.84
CNOT9-209ENST00000627282 LILRA6Q6PI73 481 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 SLC22A17Q8WUG5 538 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 SYT15Q9BQS2 421 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 TMLHEQ9NVH6 421 aa20.27■□□□□ 0.84
CNOT9-209ENST00000627282 BTNL10A8MVZ5 291 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 TGM5O43548 720 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 VNN2O95498 520 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 PNMA6AP0CW24 399 aaPredicted RBP20.27■□□□□ 0.83
CNOT9-209ENST00000627282 CPB1P15086 417 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 CDR1P51861 262 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 ORC1Q13415 861 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 ERCC6LQ2NKX8 1250 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 ANKRD54Q6NXT1 300 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 UNC93AQ86WB7 457 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 UBXN4Q92575 508 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 CASP10Q92851 521 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 LPIN3Q9BQK8 851 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 ELOVL4Q9GZR5 314 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 FAM124BQ9H5Z6 455 aaPredicted RBP20.27■□□□□ 0.83
CNOT9-209ENST00000627282 CRTAC1Q9NQ79 661 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 NAGPAQ9UK23 515 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 CDH9Q9ULB4 789 aa20.27■□□□□ 0.83
CNOT9-209ENST00000627282 PLXNA3P51805 1871 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 C5orf42Q9H799 3197 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 MYBPHLA2RUH7 354 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 ABLIM3O94929 683 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 MOCS3O95396 460 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 ATP1A1P05023 1023 aaKnown RBP20.26■□□□□ 0.83
CNOT9-209ENST00000627282 EPCAMP16422 314 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 TSPY1Q01534 308 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 GPR17Q13304 367 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 ELF2Q15723 593 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 ARHGAP44Q17R89 818 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 SLC39A12Q504Y0 691 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 FAM171BQ6P995 826 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 RNF19BQ6ZMZ0 732 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 SLC30A5Q8TAD4 765 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 ZNF461Q8TAF7 563 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 PRKAG3Q9UGI9 489 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 SALL4Q9UJQ4 1053 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 GTF3C4Q9UKN8 822 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 JRKLQ9Y4A0 524 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 CAPN6Q9Y6Q1 641 aa20.26■□□□□ 0.83
CNOT9-209ENST00000627282 FOXN3O00409 490 aaPredicted RBP20.25■□□□□ 0.83
CNOT9-209ENST00000627282 DDX3XO00571 662 aaKnown RBP eCLIP20.25■□□□□ 0.834e-11■■■□□ 17.4
CNOT9-209ENST00000627282 GLUD1P00367 558 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 SPATA31D3P0C874 917 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 HOXB8P17481 243 aaPredicted RBP20.25■□□□□ 0.83
CNOT9-209ENST00000627282 ZNF394Q53GI3 561 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 ALKBH5Q6P6C2 394 aaKnown RBP20.25■□□□□ 0.83
CNOT9-209ENST00000627282 SYCE2Q6PIF2 218 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 SPATA31D4Q6ZUB0 917 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 RSRC2Q7L4I2 434 aaKnown RBP20.25■□□□□ 0.83
CNOT9-209ENST00000627282 ACOT1Q86TX2 421 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 PGLYRP2Q96PD5 576 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 NOX5Q96PH1 765 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 ALS2CR12Q96Q35 445 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 SYT11Q9BT88 431 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 USP15Q9Y4E8 981 aaPredicted RBP20.25■□□□□ 0.83
CNOT9-209ENST00000627282 SAR1BQ9Y6B6 198 aa20.25■□□□□ 0.83
CNOT9-209ENST00000627282 ENC1O14682 589 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 PTPN1P18031 435 aaKnown RBP20.24■□□□□ 0.83
CNOT9-209ENST00000627282 RAD23BP54727 409 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 MFAP3P55082 362 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 ZP2Q05996 745 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 ENOSF1Q7L5Y1 443 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 MTERF4Q7Z6M4 381 aaKnown RBP20.24■□□□□ 0.83
CNOT9-209ENST00000627282 CRYBG2Q8N1P7 616 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 TTC39CQ8N584 583 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 B3GALNT2Q8NCR0 500 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 NT5C1AQ9BXI3 368 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 S1PR5Q9H228 398 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 CRISPLD1Q9H336 500 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 AFF4Q9UHB7 1163 aaKnown RBP20.24■□□□□ 0.83
CNOT9-209ENST00000627282 FBXW11Q9UKB1 542 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 INTUQ9ULD6 942 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 MTMR11A4FU01 709 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 C1RP00736 705 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 ATF2P15336 505 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 YWHAEP62258 255 aaKnown RBP20.24■□□□□ 0.83
CNOT9-209ENST00000627282 MDH1BQ5I0G3 518 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 TPGS2Q68CL5 300 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 TMEM270Q6UE05 265 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 ADHFE1Q8IWW8 467 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 DCP1BQ8IZD4 617 aaKnown RBP20.24■□□□□ 0.83
CNOT9-209ENST00000627282 SLC4A11Q8NBS3 891 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 ATAD1Q8NBU5 361 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 SHC3Q92529 594 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 SUSD6Q92537 303 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 GOLGA1Q92805 767 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 FAM81BQ96LP2 452 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 PACSIN1Q9BY11 444 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 CD320Q9NPF0 282 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 DZANK1Q9NVP4 752 aa20.24■□□□□ 0.83
CNOT9-209ENST00000627282 CNTN6Q9UQ52 1028 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms