RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PMM2O15305 246 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 TADA3O75528 432 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 RTN3O95197 1032 aaPredicted RBP23.75■■□□□ 1.39
SF1-220ENST00000626028 BMP6P22004 513 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 RAP1GAPP47736 663 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 NDST1P52848 882 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 TTI2Q6NXR4 508 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 KIAA1958Q8N8K9 716 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 CSGALNACT1Q8TDX6 532 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 OVCA2Q8WZ82 227 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 ZNF518BQ9C0D4 1074 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 C8orf33Q9H7E9 229 aaPredicted RBP23.75■■□□□ 1.39
SF1-220ENST00000626028 LTB4R2Q9NPC1 389 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 KIAA1468Q9P260 1216 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 NCANO14594 1321 aa23.75■■□□□ 1.39
SF1-220ENST00000626028 TRAV19A0A0A6YYK7 116 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 TRIM49BA6NDI0 452 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 PPP1R3GB7ZBB8 358 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 USP17L7P0C7H9 530 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 TCF3P15923 654 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 RPS9P46781 194 aaKnown RBP23.74■■□□□ 1.39
SF1-220ENST00000626028 WDR44Q5JSH3 913 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 TCERG1LQ5VWI1 586 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 TXNDC8Q6A555 127 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 SPOPLQ6IQ16 392 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 ACOT1Q86TX2 421 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 FAM35AQ86V20 835 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 NUP93Q8N1F7 819 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 PDZD8Q8NEN9 1154 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 CLDN23Q96B33 292 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 SLITRK1Q96PX8 696 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 NT5C1AQ9BXI3 368 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 APOBEC3GQ9HC16 384 aaKnown RBP23.74■■□□□ 1.39
SF1-220ENST00000626028 DMAP1Q9NPF5 467 aaPredicted RBP23.74■■□□□ 1.39
SF1-220ENST00000626028 TRPM5Q9NZQ8 1165 aa23.74■■□□□ 1.39
SF1-220ENST00000626028 MYO16Q9Y6X6 1858 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 GNA14O95837 355 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 CD44P16070 742 aaKnown RBP23.73■■□□□ 1.39
SF1-220ENST00000626028 DCAF17Q5H9S7 520 aaPredicted RBP23.73■■□□□ 1.39
SF1-220ENST00000626028 ISM2Q6H9L7 571 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 PAQR9Q6ZVX9 377 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 FUKQ8N0W3 1084 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 NELFBQ8WX92 580 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 USP13Q92995 863 aaPredicted RBP23.73■■□□□ 1.39
SF1-220ENST00000626028 SLC35C1Q96A29 364 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 LRRC3BQ96PB8 259 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 IER2Q9BTL4 223 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 FOXQ1Q9C009 403 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 MMRN2Q9H8L6 949 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 CSNK1G1Q9HCP0 422 aa23.73■■□□□ 1.39
SF1-220ENST00000626028 FAM170BA6NMN3 283 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 CILPO75339 1184 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 UBXN2BQ14CS0 331 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 RALGPS2Q86X27 583 aaPredicted RBP23.72■■□□□ 1.39
SF1-220ENST00000626028 STKLD1Q8NE28 680 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 MED10Q9BTT4 135 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 TMEM30AQ9NV96 361 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 IL37Q9NZH6 218 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 GCNT4Q9P109 453 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 PIAS3Q9Y6X2 628 aa23.72■■□□□ 1.39
SF1-220ENST00000626028 CLDN5O00501 218 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 FGFR1OPO95684 399 aaKnown RBP23.71■■□□□ 1.39
SF1-220ENST00000626028 USP46P62068 366 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 PAK1Q13153 545 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 KLHL10Q6JEL2 608 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 SEMA4DQ92854 862 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 HNRNPABQ99729 332 aaKnown RBP23.71■■□□□ 1.39
SF1-220ENST00000626028 DUSP9Q99956 384 aaKnown RBP23.71■■□□□ 1.39
SF1-220ENST00000626028 PNPLA8Q9NP80 782 aa23.71■■□□□ 1.39
SF1-220ENST00000626028 COL4A3Q01955 1670 aa23.7■■□□□ 1.39
SF1-220ENST00000626028 FAM92AA1XBS5 289 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 ZNF840PA6NDX5 716 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 SHISA7A6NL88 538 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 TNFRSF10BO14763 440 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 P4HA2O15460 535 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 AP1G2O75843 785 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 CKMP06732 381 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 DCNP07585 359 aaKnown RBP23.7■■□□□ 1.38
SF1-220ENST00000626028 HDCP19113 662 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 YWHAQP27348 245 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 CACNA2D1P54289 1103 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 MARSP56192 900 aaKnown RBP23.7■■□□□ 1.38
SF1-220ENST00000626028 CBWD6Q4V339 395 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 CBWD3Q5JTY5 395 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 CBWD5Q5RIA9 395 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 SNX30Q5VWJ9 437 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 CC2D1AQ6P1N0 951 aaPredicted RBP23.7■■□□□ 1.38
SF1-220ENST00000626028 FAM3CQ92520 227 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 ELMO3Q96BJ8 720 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 FAM83CQ9BQN1 747 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 FBXO44Q9H4M3 255 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 KRT82Q9NSB4 513 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 HMGXB4Q9UGU5 601 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 ARHGAP26Q9UNA1 814 aa23.7■■□□□ 1.38
SF1-220ENST00000626028 BIN1O00499 593 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 OLFM2O95897 454 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 TARSP26639 723 aaKnown RBP23.69■■□□□ 1.38
SF1-220ENST00000626028 HOXD11P31277 338 aaPredicted RBP23.69■■□□□ 1.38
SF1-220ENST00000626028 TUBP50607 506 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 CETN1Q12798 172 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms