RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PSMC1P62191 440 aaKnown RBP15.73■□□□□ 0.11
PNKP-218ENST00000625299 MRPS21P82921 87 aaKnown RBP15.73■□□□□ 0.11
PNKP-218ENST00000625299 CFAP221Q4G0U5 840 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 LYSMD4Q5XG99 296 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
PNKP-218ENST00000625299 SCARA3Q6AZY7 606 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 FILIP1Q7Z7B0 1213 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 SYT12Q8IV01 421 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 CSGALNACT2Q8N6G5 542 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 C1orf127Q8N9H9 656 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 HMGB4Q8WW32 186 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 FNBP1Q96RU3 617 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 POLMQ9NP87 494 aaPredicted RBP15.73■□□□□ 0.11
PNKP-218ENST00000625299 SMPD4Q9NXE4 827 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 PCNX2A6NKB5 2137 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 MYOFQ9NZM1 2061 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 TCRBV21S2A2A0A5A6 115 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 SGK1O00141 431 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 SLC26A4O43511 780 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 ATP2C2O75185 946 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 ABL1P00519 1130 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 PCSK1P29120 753 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 ADSSP30520 456 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 GRIK1P39086 918 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 ZXDBP98169 803 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 KDSRQ06136 332 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 RESTQ13127 1097 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 POSTNQ15063 836 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 GAB4Q2WGN9 574 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 SFR1Q86XK3 245 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 BRSK2Q8IWQ3 736 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 HDDC3Q8N4P3 179 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 DEFB119Q8N690 84 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 IL17RCQ8NAC3 791 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 ZSWIM2Q8NEG5 633 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 SPATA18Q8TC71 538 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 CACTINQ8WUQ7 758 aaKnown RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 MYLPFQ96A32 169 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 FUBP3Q96I24 572 aaKnown RBP eCLIP15.72■□□□□ 0.11
PNKP-218ENST00000625299 PNKPQ96T60 521 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 RBAKQ9NYW8 714 aaPredicted RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 MBD1Q9UIS9 605 aaPredicted RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 MSRB2Q9Y3D2 182 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 DMXL2Q8TDJ6 3036 aa15.72■□□□□ 0.11
PNKP-218ENST00000625299 DSPP15924 2871 aaKnown RBP15.72■□□□□ 0.11
PNKP-218ENST00000625299 ANKRD11Q6UB99 2663 aaPredicted RBP15.71■□□□□ 0.11
PNKP-218ENST00000625299 CEP192Q8TEP8 1941 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 H3BQV1 296 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 KAT7O95251 611 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 APODP05090 189 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 TCF3P15923 654 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 BDNFP23560 247 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 ITPKAP23677 461 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 ANXA13P27216 316 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 LHX1P48742 406 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 USP46P62068 366 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 POU5F1Q01860 360 aaKnown RBP15.71■□□□□ 0.11
PNKP-218ENST00000625299 CYP27A1Q02318 531 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 MESP2Q0VG99 397 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 DHCR24Q15392 516 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 EOGTQ5NDL2 527 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 EMC10Q5UCC4 262 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 C4orf50Q6ZRC1 276 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 DYMQ7RTS9 669 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 C12orf40Q86WS4 652 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 TOP6BLQ8N6T0 577 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 LRRC52Q8N7C0 313 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 SYT15Q9BQS2 421 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 ST6GALNAC4Q9H4F1 302 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 ARHGEF4Q9NR80 690 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.11
PNKP-218ENST00000625299 ITGA11Q9UKX5 1188 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 R3HCC1Q9Y3T6 440 aaKnown RBP15.71■□□□□ 0.11
PNKP-218ENST00000625299 CPQQ9Y646 472 aa15.71■□□□□ 0.11
PNKP-218ENST00000625299 PLXND1Q9Y4D7 1925 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 TMEM191BP0C7N4 346 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 DDIT3P35638 169 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 MAGEA11P43364 429 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 RBP5P82980 135 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 GRIN1Q05586 938 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 KCNA1Q09470 495 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 SLC23A3Q6PIS1 610 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 DENND5BQ6ZUT9 1274 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 ZNF720Q7Z2F6 126 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 HVCN1Q96D96 273 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 MTMR12Q9C0I1 747 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 MRPL44Q9H9J2 332 aaKnown RBP15.7■□□□□ 0.1
PNKP-218ENST00000625299 GDAP2Q9NXN4 497 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 CFAP97Q9P2B7 532 aa15.7■□□□□ 0.1
PNKP-218ENST00000625299 EXOC7Q9UPT5 735 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms