RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 EMC10Q5UCC4 262 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 CBWD2Q8IUF1 395 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 SPATA2LQ8IUW3 424 aaPredicted RBP11.83□□□□□ -0.52
DDX41-218ENST00000625286 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 CACTINQ8WUQ7 758 aaKnown RBP11.83□□□□□ -0.52
DDX41-218ENST00000625286 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDX41-218ENST00000625286 SPATA17Q96L03 361 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
DDX41-218ENST00000625286 OLFML3Q9NRN5 406 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 ARHGAP26Q9UNA1 814 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 TNRC6BQ9UPQ9 1833 aaKnown RBP11.82□□□□□ -0.52
DDX41-218ENST00000625286 LAMA5O15230 3695 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 ZNF840PA6NDX5 716 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 C1QTNF9BB2RNN3 333 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 LEFTY2O00292 366 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 RHOBTB1O94844 696 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 GAP43P17677 238 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 SPINK2P20155 84 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 LHX1P48742 406 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 IRX4P78413 519 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
DDX41-218ENST00000625286 RESTQ13127 1097 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 PMS2CLQ68D20 193 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 SV2BQ7L1I2 683 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 C12orf40Q86WS4 652 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 OLIG1Q8TAK6 271 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 RLN3Q8WXF3 142 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 HPDLQ96IR7 371 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 MRPL45Q9BRJ2 306 aaKnown RBP11.82□□□□□ -0.52
DDX41-218ENST00000625286 EDEM2Q9BV94 578 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
DDX41-218ENST00000625286 ZDHHC4Q9NPG8 344 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
DDX41-218ENST00000625286 EXOC7Q9UPT5 735 aa11.82□□□□□ -0.52
DDX41-218ENST00000625286 OLFM2O95897 454 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 CYP17A1P05093 508 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 IDEP14735 1019 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 WARSP23381 471 aaKnown RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 PCSK1P29120 753 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 GBP1P32455 592 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 NOVA1P51513 510 aaKnown RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 ELF2Q15723 593 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 CRY1Q16526 586 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 ANO7Q6IWH7 933 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 RHBDF2Q6PJF5 856 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 FILIP1Q7Z7B0 1213 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 SYCP3Q8IZU3 236 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 GPD1LQ8N335 351 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 TSTD1Q8NFU3 115 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 SPATA18Q8TC71 538 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 NOC3LQ8WTT2 800 aaKnown RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 ACDQ96AP0 544 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 PCED1BQ96HM7 432 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 TTLL2Q9BWV7 592 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 DPEP3Q9H4B8 488 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 MBD1Q9UIS9 605 aaPredicted RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 HCN2Q9UL51 889 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 MMP17Q9ULZ9 603 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
DDX41-218ENST00000625286 DSPP15924 2871 aaKnown RBP11.81□□□□□ -0.52
DDX41-218ENST00000625286 PKD1L2Q7Z442 2459 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 A0A0A0MRY4 1105 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 F8VP50 259 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 SGK1O00141 431 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ADAM23O75077 832 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 OAS1P00973 400 aaKnown RBP11.8□□□□□ -0.52
DDX41-218ENST00000625286 PROS1P07225 676 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 GRIK1P39086 918 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 KIR2DL1P43626 348 aaPredicted RBP11.8□□□□□ -0.52
DDX41-218ENST00000625286 SLC7A9P82251 487 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 CUL4AQ13619 759 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 KCNB1Q14721 858 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 DHCR24Q15392 516 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 SH3PXD2AQ5TCZ1 1133 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ALLCQ8N6M5 410 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 IL17RCQ8NAC3 791 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 MYCBPAPQ8TBZ2 947 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 WBP2Q969T9 261 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 CNOT6LQ96LI5 555 aaKnown RBP11.8□□□□□ -0.52
DDX41-218ENST00000625286 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms