RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MCCD1P59942 119 aaPredicted RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 DLG4P78352 724 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 CLDN10P78369 228 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 KCNMA1Q12791 1236 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 TRPC3Q13507 836 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 GRM2Q14416 872 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 FKBP15Q5T1M5 1219 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 GPR158Q5T848 1215 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 C4orf50Q6ZRC1 276 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 OSTM1Q86WC4 334 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 SPATA2LQ8IUW3 424 aaPredicted RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 GIPC2Q8TF65 315 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 MMS19Q96T76 1030 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 BCO2Q9BYV7 579 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 LTB4R2Q9NPC1 389 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 GOLGA6L6A8MZA4 724 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 CHADO15335 359 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 PHACTR2O75167 634 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 F11P03951 625 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 GYPCP04921 128 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 KRT13P13646 458 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 HMGA1P17096 107 aaKnown RBP13.46□□□□□ -0.25
PNKP-217ENST00000625216 ACAT1P24752 427 aaKnown RBP13.46□□□□□ -0.25
PNKP-217ENST00000625216 VAMP7P51809 220 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 FCHO2Q0JRZ9 810 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 WDR72Q3MJ13 1102 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 VSTM1Q6UX27 236 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 C1orf210Q8IVY1 113 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 KBTBD7Q8WVZ9 684 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 ZNF516Q92618 1163 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 MSANTD3Q96H12 275 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 MYRFLQ96LU7 910 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 PHOX2BQ99453 314 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 SYT15Q9BQS2 421 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 FOXQ1Q9C009 403 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 TTYH3Q9C0H2 523 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 SNX25Q9H3E2 840 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 KCNF1Q9H3M0 494 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 HEBP1Q9NRV9 189 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
PNKP-217ENST00000625216 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 EPHB6O15197 1021 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 NOL4O94818 638 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CYP2F1P24903 491 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 LMO2P25791 158 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 FMO5P49326 533 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 TNNC1P63316 161 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 PPP3CAQ08209 521 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 DDR2Q16832 855 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 STXBP5Q5T5C0 1151 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CELF5Q8N6W0 485 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 MYCBPAPQ8TBZ2 947 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 TMC2Q8TDI7 906 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 CSGALNACT1Q8TDX6 532 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 CLDN23Q96B33 292 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 C8orf33Q9H7E9 229 aaPredicted RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
PNKP-217ENST00000625216 THG1LQ9NWX6 298 aaKnown RBP13.45□□□□□ -0.26
PNKP-217ENST00000625216 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
PNKP-217ENST00000625216 ARNTLO00327 626 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 C4BPAP04003 597 aaKnown RBP13.44□□□□□ -0.26
PNKP-217ENST00000625216 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 CDR1P51861 262 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 GSDMDP57764 484 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 MYL6P60660 151 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 CYP4F8P98187 520 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 ENPEPQ07075 957 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 LRMPQ12912 555 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 BIRC3Q13489 604 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 TRIM14Q14142 442 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 DPY19L2P1Q6NXN4 242 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 MON1AQ86VX9 555 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 CCDC150Q8NCX0 1101 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 BPIFB1Q8TDL5 484 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 RSPRY1Q96DX4 576 aa13.44□□□□□ -0.26
PNKP-217ENST00000625216 SPATA17Q96L03 361 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms