RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SH3KBP1Q96B97 665 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 SKA1Q96BD8 255 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 CINPQ9BW66 212 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 KLC2Q9H0B6 622 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 IKZF4Q9H2S9 585 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 A0A0B4J269 797 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 PGRMC1O00264 195 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 APOL1O14791 398 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 GSTA1P08263 222 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 GSTA2P09210 222 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 CD44P16070 742 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ZFXP17010 805 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 CYP2F1P24903 491 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 CHKAP35790 457 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 KLK7P49862 253 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 GALCP54803 685 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 C9orf57Q5W0N0 161 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 NUP93Q8N1F7 819 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 PBXIP1Q96AQ6 731 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 TTC7AQ9ULT0 858 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 TPRP12270 2363 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ADGRA2Q96PE1 1338 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 A0A1W2PQC6 194 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ECEL1O95672 775 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 FGGP02679 453 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ADRB2P07550 413 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 RHOAP61586 193 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 LRRC52Q8N7C0 313 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 SERPINB11Q96P15 392 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 GPR63Q9BZJ6 419 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 EDEM3Q9BZQ6 932 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 STMN4Q9H169 189 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ARFGAP3Q9NP61 516 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 TRAF3IP3Q9Y228 551 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 HPSEQ9Y251 543 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 UBA6A0AVT1 1052 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 DNAJC6O75061 913 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 LTFP02788 710 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 POLR2EP19388 210 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 PON1P27169 355 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 WASP42768 502 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 RBM10P98175 930 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 TAF10Q12962 218 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 THEMIS2Q5TEJ8 643 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 TTI2Q6NXR4 508 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 RFFLQ8WZ73 363 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 LIMA1Q9UHB6 759 aaKnown RBP9.49□□□□□ -0.89
HDAC9-229ENST00000622668 F5P12259 2224 aa9.49□□□□□ -0.89
HDAC9-229ENST00000622668 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 MIF4GDA9UHW6 222 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 H0YHG0 523 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PALMO75781 387 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 MMEP08473 750 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CYP11B1P15538 503 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NPR3P17342 541 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PAX3P23760 479 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 TKTP29401 623 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PHBP35232 272 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 LRRC26Q2I0M4 334 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NT5DC1Q5TFE4 455 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 GAS2L3Q86XJ1 694 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF677Q86XU0 584 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 FAM172AQ8WUF8 416 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CASP10Q92851 521 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NUDCD1Q96RS6 583 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 MAGEB5Q9BZ81 275 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CDHR5Q9HBB8 845 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ATP13A1Q9HD20 1204 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 LCMT1Q9UIC8 334 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 FBXO10Q9UK96 956 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 KDM3BQ7LBC6 1761 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ARHGAP42A6NI28 874 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ATP9BO43861 1147 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 TBC1D4O60343 1298 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 RARGP13631 454 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 OR1E1P30953 314 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DLG4P78352 724 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ZBTB16Q05516 673 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PIGHQ14442 188 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 OTOP3Q7RTS5 596 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PDIK1LQ8N165 341 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DNAJC19Q96DA6 116 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 AP1M1Q9BXS5 423 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 TRIM7Q9C029 511 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 MINDY3Q9H8M7 445 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 GPATCH2LQ9NWQ4 482 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 AFF4Q9UHB7 1163 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DNMT3LQ9UJW3 386 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms