RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ACAP3Q96P50 834 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
TP53-227ENST00000622645 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
TP53-227ENST00000622645 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
TP53-227ENST00000622645 H3BRB1 525 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 RBP3P10745 1247 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 P4HA1P13674 534 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 RGS7P49802 495 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 EFTUD2Q15029 972 aaKnown RBP eCLIP12.54□□□□□ -0.43e-8■■■■■ 33.6
TP53-227ENST00000622645 ZNF792Q3KQV3 632 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 PPIL6Q8IXY8 311 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 NAT8LQ8N9F0 302 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 MAGEB18Q96M61 343 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 TRABDQ9H4I3 376 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
TP53-227ENST00000622645 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 CLUHO75153 1309 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 A0A1W2PPM1 405 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 TMEM63AO94886 807 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 APOC2P02655 101 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 ZNF143P52747 638 aaPredicted RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 CDH6P55285 790 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 RBP5P82980 135 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
TP53-227ENST00000622645 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 PPP1R21Q6ZMI0 780 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 PYROXD1Q8WU10 500 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 FAXDC2Q96IV6 333 aa12.54□□□□□ -0.4
TP53-227ENST00000622645 SBF1O95248 1867 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 A0A1B0GUA9 196 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 SUN1O94901 812 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 UBOX5O94941 541 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 PFKMP08237 780 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 TAC1P20366 129 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 MNAT1P51948 309 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
TP53-227ENST00000622645 ATP11AP98196 1134 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 XRCC4Q13426 336 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 MARCH8Q5T0T0 291 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 CYB5D1Q6P9G0 228 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 C3orf62Q6ZUJ4 267 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 CYP4V2Q6ZWL3 525 aaPredicted RBP12.53□□□□□ -0.4
TP53-227ENST00000622645 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 PCGF5Q86SE9 256 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 ASNSD1Q9NWL6 643 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 PPEF2O14830 753 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 GPD1P21695 349 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 RPA3P35244 121 aaPredicted RBP12.53□□□□□ -0.4
TP53-227ENST00000622645 ARL4CP56559 192 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 LCLAT1Q6UWP7 414 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
TP53-227ENST00000622645 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
TP53-227ENST00000622645 MCF2LO15068 1137 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 ASMTLO95671 621 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 PCK1P35558 622 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 IL9RQ01113 521 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 NR1H3Q13133 447 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 BBS9Q3SYG4 887 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
TP53-227ENST00000622645 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
TP53-227ENST00000622645 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms