RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 TOB2Q14106 344 aaPredicted RBP7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 ODF1Q14990 250 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 UGT8Q16880 541 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PRAMEF19Q5SWL8 479 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 RNF207Q6ZRF8 634 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 Q6ZUG5 572 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 RUFY3Q7L099 469 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 BCL6BQ8N143 479 aaPredicted RBP7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 FANCBQ8NB91 859 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 WDR48Q8TAF3 677 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 DIS3LQ8TF46 1054 aaKnown RBP7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 TBC1D5Q92609 795 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 FAXDC2Q96IV6 333 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 SLC2A13Q96QE2 648 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 LZTS2Q9BRK4 669 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 KCTD10Q9H3F6 313 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 VAT1LQ9HCJ6 419 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 USP18Q9UMW8 372 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 MRPL11Q9Y3B7 192 aaKnown RBP7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA8Q9Y5G5 932 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA7Q9Y5G6 932 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA6Q9Y5G7 932 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA3Q9Y5H0 932 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHGA2Q9Y5H1 932 aa7.74□□□□□ -1.17
RAB28P4-201ENST00000622233 CEP290O15078 2479 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 ASB14A6NK59 587 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 H0Y858 1186 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 ZBTB43O43298 467 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 OSMP13725 252 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 AKR1A1P14550 325 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 RPL13P26373 211 aaKnown RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 RAP1GAPP47736 663 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 HSD17B4P51659 736 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 CCT2P78371 535 aaKnown RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 MCL1Q07820 350 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 CLUL1Q15846 466 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 TP53I13Q8NBR0 393 aaPredicted RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 DNERQ8NFT8 737 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 OR5AN1Q8NGI8 311 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 ACAP3Q96P50 834 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 UPF3BQ9BZI7 483 aaKnown RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 ABHD16BQ9H3Z7 469 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 RBM28Q9NW13 759 aaKnown RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 DNAJC28Q9NX36 388 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 MKS1Q9NXB0 559 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 KCNG1Q9UIX4 513 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 ZHX1Q9UKY1 873 aaPredicted RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 CNPY2Q9Y2B0 182 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 PCDHA1Q9Y5I3 950 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 DDX49Q9Y6V7 483 aaKnown RBP7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 FRMPD4Q14CM0 1322 aa7.73□□□□□ -1.17
RAB28P4-201ENST00000622233 WDR81Q562E7 1941 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 DNM1LO00429 736 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 EIF5BO60841 1220 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 OPHN1O60890 802 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 KLHL18O94889 574 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 TFRCP02786 760 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 CALML3P27482 149 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 STAT5BP51692 787 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 KCNQ1P51787 676 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 AFF3P51826 1226 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 LGALS4P56470 323 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 TRAF1Q13077 416 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 ACVR2BQ13705 512 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 ZNF385BQ569K4 471 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 ANO1Q5XXA6 986 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 GRAMD4Q6IC98 578 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 TAPT1Q6NXT6 567 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 SYNE3Q6ZMZ3 975 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 OTOP2Q7RTS6 562 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 ZBTB46Q86UZ6 589 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 SLC41A1Q8IVJ1 513 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 FBXO16Q8IX29 292 aaPredicted RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 SAMD3Q8N6K7 520 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 PAWRQ96IZ0 340 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 PITHD1Q9GZP4 211 aaPredicted RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 MAP3K20Q9NYL2 800 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 ADD3Q9UEY8 706 aaKnown RBP7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 SYNRGQ9UMZ2 1314 aa7.72□□□□□ -1.17
RAB28P4-201ENST00000622233 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 RFXAPO00287 272 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 CTAGE5O15320 804 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 DUSP11O75319 330 aaKnown RBP7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 CFBP00751 764 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 RARBP10826 455 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 CST5P28325 142 aaPredicted RBP7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 PDIA3P30101 505 aaKnown RBP7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 RAB27AP51159 221 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 BCAR1P56945 870 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 CDK17Q00537 523 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 PPP2R5BQ15173 497 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 LRRC41Q15345 812 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 KCNK18Q7Z418 384 aa7.71□□□□□ -1.18
RAB28P4-201ENST00000622233 KLHDC9Q8NEP7 349 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms