RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 UBQLN1Q9UMX0 589 aaKnown RBP22.35■■□□□ 1.17
LIME1-210ENST00000621325 GABBR2O75899 941 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 C6orf222P0C671 652 aaPredicted RBP22.34■■□□□ 1.17
LIME1-210ENST00000621325 AXLP30530 894 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 LSP1P33241 339 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 OASLQ15646 514 aaKnown RBP22.34■■□□□ 1.17
LIME1-210ENST00000621325 DRICH1Q6PGQ1 229 aaPredicted RBP22.34■■□□□ 1.17
LIME1-210ENST00000621325 RXFP2Q8WXD0 754 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 TMEM121Q9BTD3 319 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 FAM124BQ9H5Z6 455 aaPredicted RBP22.34■■□□□ 1.17
LIME1-210ENST00000621325 SLC12A6Q9UHW9 1150 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 Q9Y3F1 56 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
LIME1-210ENST00000621325 C2CD4BA6NLJ0 364 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 PIRO00625 290 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 PDGFRBP09619 1106 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 FGFR1P11362 822 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 CRYBB1P53674 252 aaPredicted RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 VCPP55072 806 aaKnown RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 ALLCQ8N6M5 410 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 BCAS4Q8TDM0 211 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 SOCS4Q8WXH5 440 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 ADAM7Q9H2U9 754 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 USP18Q9UMW8 372 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 IPPQ9Y573 584 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 CST8O60676 142 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 TRUB2O95900 331 aaKnown RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 SLC10A3P09131 477 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 PDGFRAP16234 1089 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 LMO2P25791 158 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 ZNF143P52747 638 aaPredicted RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 IFI35P80217 286 aaPredicted RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 PLCB3Q01970 1234 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 KYNUQ16719 465 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 CDO1Q16878 200 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 TRMT10CQ7L0Y3 403 aaKnown RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 SMG8Q8ND04 991 aaKnown RBP22.33■■□□□ 1.17
LIME1-210ENST00000621325 ARHGAP39Q9C0H5 1083 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 ZFYVE28Q9HCC9 887 aa22.33■■□□□ 1.17
LIME1-210ENST00000621325 A8MXQ7 604 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 RNF8O76064 485 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 IVLP07476 585 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 GPD1P21695 349 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 HOXC8P31273 242 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 ARSEP51690 589 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 PPP2R2AP63151 447 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 FBXO47Q5MNV8 452 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 SCUBE3Q8IX30 993 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 KBTBD7Q8WVZ9 684 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 KATNAL1Q9BW62 490 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 B3GNT5Q9BYG0 378 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 OTUD4Q01804 1114 aaKnown RBP22.32■■□□□ 1.16
LIME1-210ENST00000621325 HIBCHQ6NVY1 386 aaPredicted RBP22.32■■□□□ 1.16
LIME1-210ENST00000621325 CYP4V2Q6ZWL3 525 aaPredicted RBP22.32■■□□□ 1.16
LIME1-210ENST00000621325 KCTD6Q8NC69 237 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 SLC35B2Q8TB61 432 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 ACTL9Q8TC94 416 aa22.32■■□□□ 1.16
LIME1-210ENST00000621325 NKD2Q969F2 451 aaPredicted RBP22.32■■□□□ 1.16
LIME1-210ENST00000621325 CCDC130P13994 396 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 AKR1A1P14550 325 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CORO7P57737 925 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CAV1Q03135 178 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 LMNB2Q03252 620 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 TAZQ16635 292 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 FAM228AQ86W67 206 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 ARFGAP2Q8N6H7 521 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CMASQ8NFW8 434 aaPredicted RBP22.31■■□□□ 1.16
LIME1-210ENST00000621325 SLC35F5Q8WV83 523 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 PGM2Q96G03 612 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CFAP57Q96MR6 1250 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CNPY3Q9BT09 278 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 ASNSD1Q9NWL6 643 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 KPNA7A9QM74 516 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 FAM155AB1AL88 458 aaPredicted RBP22.31■■□□□ 1.16
LIME1-210ENST00000621325 IGFBP6P24592 240 aaPredicted RBP22.31■■□□□ 1.16
LIME1-210ENST00000621325 ATP11AP98196 1134 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 STILQ15468 1287 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 OLFML1Q6UWY5 402 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 CXCL17Q6UXB2 119 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 KHSRPQ92945 711 aaKnown RBP eCLIP22.31■■□□□ 1.16
LIME1-210ENST00000621325 SLC4A5Q9BY07 1137 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 DRG1Q9Y295 367 aaKnown RBP22.31■■□□□ 1.16
LIME1-210ENST00000621325 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
LIME1-210ENST00000621325 PGK1P00558 417 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 IFNB1P01574 187 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 CDR1P51861 262 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 SEC24CP53992 1094 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 GPS1Q13098 491 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 MMRN1Q13201 1228 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 LONRF1Q17RB8 773 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 XKR4Q5GH76 650 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 GNASQ5JWF2 1037 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 TWF2Q6IBS0 349 aaKnown RBP22.3■■□□□ 1.16
LIME1-210ENST00000621325 BBS12Q6ZW61 710 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 CALN1Q9BXU9 219 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 MIS12Q9H081 205 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 NINJ2Q9NZG7 142 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 MEIS3P2A8K0S8 358 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 SGK1O00141 431 aa22.3■■□□□ 1.16
LIME1-210ENST00000621325 RGS16O15492 202 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms