RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 UTS2BQ765I0 119 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 TRMT10CQ7L0Y3 403 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 TREML1Q86YW5 311 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 MFSD14AQ96MC6 490 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 CALN1Q9BXU9 219 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 RNPEPL1Q9HAU8 725 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 ANKEF1Q9NU02 776 aa11.2□□□□□ -0.62
CDH1-214ENST00000621016 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
CDH1-214ENST00000621016 A0A1W2PPM1 405 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 GGPS1O95749 300 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 SSTR1P30872 391 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 CETN2P41208 172 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 HALP42357 657 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 TMEM132BQ14DG7 1078 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 DNAJC24Q6P3W2 148 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 KCTD17Q8N5Z5 321 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 FITM2Q8N6M3 262 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 PPP1R13LQ8WUF5 828 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 SCG3Q8WXD2 468 aaKnown RBP11.19□□□□□ -0.62
CDH1-214ENST00000621016 HSPH1Q92598 858 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
CDH1-214ENST00000621016 SPATA16Q9BXB7 569 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 KLHL14Q9P2G3 628 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 MOSPD1Q9UJG1 213 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 EXTL3O43909 919 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 PAEPP09466 180 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 IVDP26440 423 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
CDH1-214ENST00000621016 LRRC36Q1X8D7 754 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 MCPH1Q8NEM0 835 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 GRK7Q8WTQ7 553 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 INO80BQ9C086 356 aaPredicted RBP11.19□□□□□ -0.62
CDH1-214ENST00000621016 ZNF302Q9NR11 478 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 HAO1Q9UJM8 370 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 PLSCR1O15162 318 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 PEX11AO75192 247 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 ALADP13716 330 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 GLRA2P23416 452 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 FOXN2P32314 431 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 NSUN2Q08J23 767 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDH1-214ENST00000621016 SGSM1Q2NKQ1 1148 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 ZACNQ401N2 412 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 ABRAQ8N0Z2 381 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 LPAR1Q92633 364 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 PTPRN2Q92932 1015 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 WHRNQ9P202 907 aa11.19□□□□□ -0.62
CDH1-214ENST00000621016 TRIM64CA6NLI5 447 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 XPOTO43592 962 aaKnown RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 TJP3O95049 919 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 TFPTP0C1Z6 253 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 KCNA2P16389 499 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 NEK3P51956 506 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 HADHBP55084 474 aaKnown RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 BASP1P80723 227 aaKnown RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 GCNT1Q02742 428 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 GSTM4Q03013 218 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 RNF149Q8NC42 400 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 TMC2Q8TDI7 906 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 PPP1R14BQ96C90 147 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 TUBGCP5Q96RT8 1024 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 MIS12Q9H081 205 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 ARMC7Q9H6L4 198 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 TIMM22Q9Y584 194 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 HEMK1Q9Y5R4 338 aaPredicted RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 EPHB2P29323 1055 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 NOMO3P69849 1222 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 MAP7Q14244 749 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 TAF5Q15542 800 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 CYP1B1Q16678 543 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
CDH1-214ENST00000621016 RHPN2Q8IUC4 686 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 FEZF2Q8TBJ5 459 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 LRRC8CQ8TDW0 803 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 ERP27Q96DN0 273 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 COQ4Q9Y3A0 265 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 SIPA1L1O43166 1804 aa11.18□□□□□ -0.62
CDH1-214ENST00000621016 ASAP2O43150 1006 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CDH16O75309 829 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 PGM3O95394 542 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ASLP04424 464 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CD48P09326 243 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 GNAZP19086 355 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 BACE1P56817 501 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 OGDHQ02218 1023 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 LY6KQ17RY6 165 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms