RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ALYREFQ86V81 257 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 ARFGAP1Q8N6T3 406 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 CEP120Q8N960 986 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 TMEM35BQ8NCS4 154 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 FAM237BA0A1B0GVD1 139 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 MMP10P09238 476 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 KCNA3P22001 575 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 ABCD1P33897 745 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 ELK3P41970 407 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 SERPINB4P48594 390 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 RAB27AP51159 221 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 TAZQ16635 292 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 KBTBD12Q3ZCT8 623 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 TTC13Q8NBP0 860 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 PPFIBP2Q8ND30 876 aa20.47■□□□□ 0.87
PDLIM3-212ENST00000620787 TCRBV9S1A1TA0A576 114 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 KLF11O14901 512 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 MAP3K7O43318 606 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 PIGRP01833 764 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 GSTA2P09210 222 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 CACNA2D1P54289 1103 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 CCDC60Q8IWA6 550 aaPredicted RBP20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 ZNF184Q99676 751 aaPredicted RBP20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 CAPN14A8MX76 684 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 SMAPO00193 183 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 CPA2P48052 419 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 ZNF200P98182 395 aaPredicted RBP20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 DGKZQ13574 1117 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 KCNT1Q5JUK3 1230 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 ARHGAP24Q8N264 748 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 ZFAND2BQ8WV99 257 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 TRAPPC9Q96Q05 1148 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 MSTO1Q9BUK6 570 aa20.46■□□□□ 0.87
PDLIM3-212ENST00000620787 MAGEA13PA6NCF6 341 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 ANKRD33BA6NCL7 494 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 MAGEC1O60732 1142 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 DKC1O60832 514 aaKnown RBP eCLIP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 LRCH4O75427 683 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 ASNSP08243 561 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 KCNA2P16389 499 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 KDELR1P24390 212 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 PSMA2P25787 234 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 CDH5P33151 784 aaPredicted RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 BASP1P80723 227 aaKnown RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 BIRC2Q13490 618 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 HSF5Q4G112 596 aaPredicted RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 TREML1Q86YW5 311 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 FAM71DQ8N9W8 422 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 FBXO27Q8NI29 283 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 ZNF518BQ9C0D4 1074 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 A0A0B4J269 797 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 KBTBD13C9JR72 458 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 ASS1P00966 412 aaKnown RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 CST3P01034 146 aaPredicted RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 EDN1P05305 212 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 PSAPP07602 524 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 INHBAP08476 426 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 CD48P09326 243 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 RFC1P35251 1148 aaPredicted RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 GCLCP48506 637 aaPredicted RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 NRLP54845 237 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 EMC2Q15006 297 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 MTERF2Q49AM1 385 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 GPRASP2Q96D09 838 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 FAM161BQ96MY7 647 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 TARS2Q9BW92 718 aaKnown RBP20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 IKBKGQ9Y6K9 419 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 KAT6AQ92794 2004 aa20.45■□□□□ 0.86
PDLIM3-212ENST00000620787 B2RBV5 119 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 AP1G2O75843 785 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 LDHAP00338 332 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 DPYSL3Q14195 570 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 SEZ6Q53EL9 994 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 ZNF394Q53GI3 561 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 SLFN12LQ6IEE8 588 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 CDHR3Q6ZTQ4 885 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 VSIG10LQ86VR7 867 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 JOSD2Q8TAC2 188 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 CCDC110Q8TBZ0 833 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 TFAP2BQ92481 460 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 TMEM143Q96AN5 459 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 TEX264Q9Y6I9 313 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 ADGRA2Q96PE1 1338 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 F8W8V4 182 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 H3BRJ5 948 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 STAM2O75886 525 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 ITGBL1O95965 494 aaPredicted RBP20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 KRT7P08729 469 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 SP4Q02446 784 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 RFX8Q6ZV50 586 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 TMPRSS6Q8IU80 811 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 THNSL1Q8IYQ7 743 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 KIAA0319LQ8IZA0 1049 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 KCNN1Q92952 543 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 SRPK1Q96SB4 655 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms