RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC4A5Q9BY07 1137 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PACSIN1Q9BY11 444 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ZBP1Q9H171 429 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PRO3102Q9H379 93 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 CSNK1G1Q9HCP0 422 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ALG13Q9NP73 1137 aaKnown RBP8.48□□□□□ -1.05
CPNE3-209ENST00000620393 CYLDQ9NQC7 956 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ADAM22Q9P0K1 906 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 FNIP2Q9P278 1114 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 PCDHB5Q9Y5E4 795 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 IRAK3Q9Y616 596 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 ATP8B3O60423 1300 aa8.48□□□□□ -1.05
CPNE3-209ENST00000620393 A0A0U1RQJ8 604 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 GOLGA6L9A6NEM1 432 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 BTNL10A8MVZ5 291 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 H3BNC9 293 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TULP2O00295 520 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 XPO1O14980 1071 aaKnown RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 AP1G2O75843 785 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 BEST1O76090 585 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ABLIM3O94929 683 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CYP1A2P05177 515 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CALB1P05937 261 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CPB1P15086 417 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 RPL17P18621 184 aaKnown RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ABCB4P21439 1286 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CYP2F1P24903 491 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MAGEA11P43364 429 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ACADSBP45954 432 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 PLA2G4AP47712 749 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MAP3K7CLP57077 242 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ROR1Q01973 937 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CREMQ03060 361 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 PDCLQ13371 301 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 GPM6BQ13491 265 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ZNF268Q14587 947 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TCEAL1Q15170 157 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 PTPN14Q15678 1187 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 LIN9Q5TKA1 542 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TPGS2Q68CL5 300 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 VSTM1Q6UX27 236 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MMS22LQ6ZRQ5 1243 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CLEC20AQ6ZU45 233 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MON1BQ7L1V2 547 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 SPRED2Q7Z698 418 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ATAD1Q8NBU5 361 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MSANTD4Q8NCY6 345 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ZMIZ2Q8NF64 920 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ZNF461Q8TAF7 563 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 SPPL2BQ8TCT7 592 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 POF1BQ8WVV4 589 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 ATRIPQ8WXE1 791 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 AUTS2Q8WXX7 1259 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CTNNBL1Q8WYA6 563 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 KCTD13Q8WZ19 329 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TRIM11Q96F44 468 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 C8orf48Q96LL4 319 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 CPXM1Q96SM3 734 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 KCNK16Q96T55 309 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MIS12Q9H081 205 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 NGRNQ9NPE2 291 aaKnown RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 AVENQ9NQS1 362 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
CPNE3-209ENST00000620393 MAFFQ9ULX9 164 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
CPNE3-209ENST00000620393 A0A0A6YYK5 440 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 WDR27A2RRH5 827 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MTMR11A4FU01 709 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 USP27XA6NNY8 438 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ESPNB1AK53 854 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 HHLA1C9JL84 531 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 FSCN2O14926 492 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 GRM6O15303 877 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TEX28O15482 410 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 KRT86O43790 486 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 VNN2O95498 520 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ABL1P00519 1130 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 C1RP00736 705 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 CNPP09543 421 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 HAPLN1P10915 354 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ATF2P15336 505 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RRM1P23921 792 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 DNAJB1P25685 340 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 DNAJB2P25686 324 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MSNP26038 577 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 GRIK1P39086 918 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TUFMP49411 452 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RGS7P49802 495 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 CDR1P51861 262 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms