RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 AKT3Q9Y243 479 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ACTL7BQ9Y614 415 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PARP14Q460N5 1801 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 BHMG1C9JSJ3 638 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CA12O43570 354 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MAFO75444 373 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ESRRAP11474 423 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PTK6Q13882 451 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 RCN2Q14257 317 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 P3H1Q32P28 736 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 WASHC2DQ5SRD0 308 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 IER5Q5VY09 327 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MAMDC4Q6UXC1 1216 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ECHDC2Q86YB7 292 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 RHOT1Q8IXI2 618 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 UBR7Q8N806 425 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PPP1R13LQ8WUF5 828 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM213AQ9BRX8 229 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 TARS2Q9BW92 718 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 OSBPL2Q9H1P3 480 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MRPL47Q9HD33 250 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PAPOLBQ9NRJ5 636 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 STARD13Q9Y3M8 1113 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ZMYM2Q9UBW7 1377 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CFAP69A5D8W1 941 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CCDC22O60826 627 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 VHLP40337 213 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NAMPTP43490 491 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 FCGRTP55899 365 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PTK7Q13308 1070 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MYBPC2Q14324 1141 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CYP1B1Q16678 543 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 DGKDQ16760 1214 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 TBCELQ5QJ74 424 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 RASIP1Q5U651 963 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC47A2Q86VL8 602 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PALM2Q8IXS6 379 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PMM1Q92871 262 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CAPNS2Q96L46 248 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM118BQ9BPY3 351 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NTPCRQ9BSD7 190 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 LRMDAQ9H2I8 198 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 I3L4J1 428 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 SGK1O00141 431 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CREB3O43889 395 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 SNUPNO95149 360 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ALDH1A1P00352 501 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 GJB1P08034 283 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 MYBL1P10243 752 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 RALAP11233 206 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ALADP13716 330 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 EPHB2P29323 1055 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PAPOLAP51003 745 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NFIL3Q16649 462 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 GALNTL6Q49A17 601 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ACAD10Q6JQN1 1059 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 DCUN1D2Q6PH85 259 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NLRP9Q7RTR0 991 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NOP9Q86U38 636 aaKnown RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 CBWD2Q8IUF1 395 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ZBED8Q8IZ13 594 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 SOCS4Q8WXH5 440 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ST6GALNAC4Q9H4F1 302 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 PDLIM7Q9NR12 457 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NENFQ9UMX5 172 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 NEU2Q9Y3R4 380 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 LOC285556D6RIA3 1793 aa7.32□□□□□ -1.24
SRGAP3-213ENST00000618999 ADGRA3Q8IWK6 1321 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 KIAA1217Q5T5P2 1943 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FSCN2O14926 492 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TRPA1O75762 1119 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 KRT1P04264 644 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MYL3P08590 195 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 GNAT1P11488 350 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CYP11B1P15538 503 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ATP6V1C1P21283 382 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PTPN4P29074 926 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ARL2P36404 184 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PEX5P50542 639 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 RTP1P59025 263 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 GPS1Q13098 491 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TFDP1Q14186 410 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MXD4Q14582 209 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TARBP2Q15633 366 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 SNRNP35Q16560 246 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MAPK6Q16659 721 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TAF1BQ53T94 588 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ZBTB33Q86T24 672 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CFAP61Q8NHU2 1237 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms