RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	TBC1D31	Q96DN5	1066 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PIWIL1	Q96J94	861 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PEBP4	Q96S96	227 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	WDR83	Q9BRX9	315 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	RNF19A	Q9NV58	838 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ERAP1	Q9NZ08	941 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	SHOC2	Q9UQ13	582 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	POLR2A	P24928	1970 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	DNAJC25-GNG10	A0A024R161	153 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	TMEM63A	O94886	807 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	MAP3K6	O95382	1288 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ZNF286B	P0CG31	522 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	RBP3	P10745	1247 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ARL4C	P56559	192 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	GEMIN4	P57678	1058 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ATP11A	P98196	1134 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	TTLL4	Q14679	1199 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	SCYL2	Q6P3W7	929 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	DARS2	Q6PI48	645 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ILDR2	Q71H61	639 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PCGF5	Q86SE9	256 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ERO1B	Q86YB8	467 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	TDRP	Q86YL5	185 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	TTC13	Q8NBP0	860 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	CXorf38	Q8TB03	319 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	CXCL16	Q9H2A7	254 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PDZD7	Q9H5P4	517 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PHTF1	Q9UMS5	762 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TP53-223	ENST00000618944	ATP6V1G2	O95670	118 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	CYP2C8	P10632	490 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	PDGFRA	P16234	1089 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	ARF4	P18085	180 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-223	ENST00000618944	CYP3A5	P20815	502 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	PHKA2	P46019	1235 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	CDH6	P55285	790 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	BNIP1	Q12981	228 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	NR1H3	Q13133	447 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	DPYSL3	Q14195	570 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	SPARCL1	Q14515	664 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	AMHR2	Q16671	573 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	SWT1	Q5T5J6	900 aa	Known RBP	11.73	□□□□□ -0.53
TP53-223	ENST00000618944	TRNP1	Q6NT89	227 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	IGDCC3	Q8IVU1	814 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	CMAS	Q8NFW8	434 aa	Predicted RBP	11.73	□□□□□ -0.53
TP53-223	ENST00000618944	PPP1R13L	Q8WUF5	828 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	NLRP7	Q8WX94	980 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	RXFP2	Q8WXD0	754 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	KLHL29	Q96CT2	875 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	RXFP1	Q9HBX9	757 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	WDR35	Q9P2L0	1181 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	GINS2	Q9Y248	185 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944	STK38L	Q9Y2H1	464 aa		11.73	□□□□□ -0.53
TP53-223	ENST00000618944		E5RJQ4	531 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	AVIL	O75366	819 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	NQO1	P15559	274 aa	Known RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	SLC26A2	P50443	739 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	MKRN3	Q13064	507 aa	Known RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	HHAT	Q5VTY9	493 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	FNIP1	Q8TF40	1166 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	OPTN	Q96CV9	577 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	MCRS1	Q96EZ8	462 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	NOD2	Q9HC29	1040 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	ALG13	Q9NP73	1137 aa	Known RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	UBN1	Q9NPG3	1134 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	ADARB2	Q9NS39	739 aa	Known RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	ASNSD1	Q9NWL6	643 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	GPATCH2L	Q9NWQ4	482 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	CHMP2B	Q9UQN3	213 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	EFR3B	Q9Y2G0	817 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	CXCL11	O14625	94 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	MCF2L	O15068	1137 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	PRPF4	O43172	522 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	LGALS2	P05162	132 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	GCLC	P48506	637 aa	Predicted RBP	11.72	□□□□□ -0.53
TP53-223	ENST00000618944	TMEM132D	Q14C87	1099 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	TAZ	Q16635	292 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	LVRN	Q6Q4G3	990 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	FAM183BP	Q6ZVS7	135 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	ANKRD13A	Q8IZ07	590 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	ANKLE1	Q8NAG6	615 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	AFG1L	Q8WV93	481 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	SGIP1	Q9BQI5	828 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	DPP3	Q9NY33	737 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944	TSPAN16	Q9UKR8	245 aa		11.72	□□□□□ -0.53
TP53-223	ENST00000618944		A8MUI8	341 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944		H7C0C1	242 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	APOC4-APOC2	K7ER74	178 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	TYROBP	O43914	113 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	APOC2	P02655	101 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	MCF2	P10911	925 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	FGFR1	P11362	822 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	VDR	P11473	427 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	PHB	P35232	272 aa		11.71	□□□□□ -0.53
TP53-223	ENST00000618944	MSH2	P43246	934 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms