RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CEP350Q5VT06 3117 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 TP73O15350 636 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 LIASO43766 372 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 RNF8O76064 485 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 PDGFRAP16234 1089 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 IVDP26440 423 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 LMAN1P49257 510 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 RPAINQ86UA6 219 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 SCUBE3Q8IX30 993 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 SH2D3CQ8N5H7 860 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 FAM76AQ8TAV0 307 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 CNPY3Q9BT09 278 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 B3GNT5Q9BYG0 378 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 DNPEPQ9ULA0 475 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 BRCA2P51587 3418 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 CD48P09326 243 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CD52P31358 61 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 PMS2P54278 862 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 ZNF844Q08AG5 666 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 TMEM110Q86TL2 294 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 PRUNE1Q86TP1 453 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 SNF8Q96H20 258 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 PEBP4Q96S96 227 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CHST12Q9NRB3 414 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 MIOSQ9NXC5 875 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 WHRNQ9P202 907 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 THSD7BQ9C0I4 1608 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 GPR182O15218 404 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 PAPSS1O43252 624 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 TRUB2O95900 331 aaKnown RBP18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 GHRP10912 638 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 ACAP1Q15027 740 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CDO1Q16878 200 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CCDC142Q17RM4 750 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 HSPH1Q92598 858 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 EPB41L4BQ9H329 900 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 SRRDQ9UH36 339 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 PADI3Q9ULW8 664 aa18.21■□□□□ 0.51
PCDHGC3-205ENST00000617641 CYB561D2O14569 222 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 MGEA5O60502 916 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ATF2P15336 505 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 KDELR1P24390 212 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 BCAT1P54687 386 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 DYNLT1P63172 113 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC6A3Q01959 620 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 BST2Q10589 180 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 BYSLQ13895 437 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 DEFB115Q30KQ5 88 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 GSTA5Q7RTV2 222 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 TOP6BLQ8N6T0 577 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ANKRD52Q8NB46 1076 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC2A14Q8TDB8 520 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 KHSRPQ92945 711 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 PSD3Q9NYI0 1048 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ATP2C2O75185 946 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 WARSP23381 471 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ADCY8P40145 1251 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 CDR1P51861 262 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 UBAP2Q5T6F2 1119 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 WSCD1Q658N2 575 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 AGMOQ6ZNB7 445 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 CLEC4CQ8WTT0 213 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 STK32AQ8WU08 396 aa18.2■□□□□ 0.5
PCDHGC3-205ENST00000617641 ARL5CA6NH57 179 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 TRPA1O75762 1119 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 THP07101 528 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ITIH2P19823 946 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ACAT1P24752 427 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 PCK1P35558 622 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 SCNN1GP51170 649 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ITGA8P53708 1063 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ATP11AP98196 1134 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 CCDC14Q49A88 953 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 DNAJC21Q5F1R6 531 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 CYP4V2Q6ZWL3 525 aaPredicted RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 CCDC25Q86WR0 208 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 PCSK9Q8NBP7 692 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 KCTD6Q8NC69 237 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 B3GALNT2Q8NCR0 500 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 FAM129AQ9BZQ8 928 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 PABPC3Q9H361 631 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 CENPHQ9H3R5 247 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 TMBIM4Q9HC24 238 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 LRRC4CQ9HCJ2 640 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC38A7Q9NVC3 462 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 SAE1Q9UBE0 346 aaPredicted RBP18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ZNF148Q9UQR1 794 aa18.19■□□□□ 0.5
PCDHGC3-205ENST00000617641 ITGA7Q13683 1181 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 TAZQ16635 292 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 SPDYCQ5MJ68 293 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms