RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LTBRP36941 435 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 GPD2P43304 727 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 FMO1Q01740 532 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 COL19A1Q14993 1142 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 SYCE2Q6PIF2 218 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 TMC5Q6UXY8 1006 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 PIGZQ86VD9 579 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 TC2NQ8N9U0 490 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 SLC35F5Q8WV83 523 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 PRKD2Q9BZL6 878 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 LHX5Q9H2C1 402 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 ZNHIT6Q9NWK9 470 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 SLC38A8A6NNN8 435 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 XPO1O14980 1071 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 XYLBO75191 536 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 TBX10O75333 385 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 SERPING1P05155 500 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 TNFAIP3P21580 790 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 HOXA9P31269 272 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ARID5BQ14865 1188 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 VEPH1Q14D04 833 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 TAF12Q16514 161 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 MEA1Q16626 185 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 HGSNATQ68CP4 663 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 DNAJB7Q7Z6W7 309 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ELMOD1Q8N336 334 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 WDTC1Q8N5D0 677 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 FEZF2Q8TBJ5 459 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ZNF707Q96C28 371 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 ZNF512Q96ME7 567 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 PCDHB18PQ96TA0 734 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 UBXN6Q9BZV1 441 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 PIDD1Q9HB75 910 aa16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-204ENST00000617222 FAM170AA1A519 330 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 GOLGA6L6A8MZA4 724 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 RGS7P49802 495 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 PLXNA3P51805 1871 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 PMF1Q6P1K2 205 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 DENND5BQ6ZUT9 1274 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 ITIH5Q86UX2 942 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 NUP93Q8N1F7 819 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 TMEM35BQ8NCS4 154 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 C1orf131Q8NDD1 294 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 SMG7Q92540 1137 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 SYT11Q9BT88 431 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 CYTH4Q9UIA0 394 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 MAGED2Q9UNF1 606 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
PCDHGC3-204ENST00000617222 TNFRSF10BO14763 440 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 POU2F2P09086 479 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CSH1P0DML2 217 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CSH2P0DML3 217 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 SLC5A3P53794 718 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 USP46P62068 366 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 IFRD2Q12894 506 aaPredicted RBP16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CLUL1Q15846 466 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 NAA35Q5VZE5 725 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 TRIM72Q6ZMU5 477 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 GPRIN1Q7Z2K8 1008 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 SCAMP5Q8TAC9 235 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CPA5Q8WXQ8 436 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 PSMG2Q969U7 264 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 MSLNLQ96KJ4 702 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CEP295NLQ96MC4 621 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CHP1Q99653 195 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 S1PR5Q9H228 398 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 UBE2ZQ9H832 354 aaPredicted RBP16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 LRRC4Q9HBW1 653 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 PNPLA8Q9NP80 782 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 ST7Q9NRC1 585 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 HCFC1R1Q9NWW0 138 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 ARHGAP20Q9P2F6 1191 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 CDH23Q9H251 3354 aa16.48■□□□□ 0.23
PCDHGC3-204ENST00000617222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 H3BQ06 376 aaPredicted RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 PIK3R2O00459 728 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms