RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ANKEF1Q9NU02 776 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 GOLGA8TH3BQL2 631 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SOX6P35712 828 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SH3TC2Q8TF17 1288 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SPATA17Q96L03 361 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 RNF103O00237 685 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 IL18RAPO95256 599 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ATP5BP06576 529 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 THEMIS2Q5TEJ8 643 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 PLA2G4FQ68DD2 849 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ZFP1Q6P2D0 407 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ZCCHC7Q8N3Z6 543 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 MREGQ8N565 214 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 PLEKHA8Q96JA3 519 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ZFYVE19Q96K21 471 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 PCDH9Q9HC56 1237 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 LATS2Q9NRM7 1088 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 ADGRA2Q96PE1 1338 aa11.04□□□□□ -0.64
CLTCL1-209ENST00000617103 TBC1D12O60347 775 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 AKAP3O75969 853 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PSMG1O95456 288 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 EIF2B2P49770 351 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 ST3GAL1Q11201 340 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 EMC2Q15006 297 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 ERMARDQ5T6L9 678 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 CLEC10AQ8IUN9 316 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF75CPQ92670 426 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 MTERF3Q96E29 417 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 C17orf75Q9HAS0 396 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 DAPK2Q9UIK4 370 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PRR12Q9ULL5 1215 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 DAGLAQ9Y4D2 1042 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 SLC30A1Q9Y6M5 507 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PREX2Q70Z35 1606 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 C1orf232A0A0U1RR37 186 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 AP1G2O75843 785 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RAD51Q06609 339 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 SPOCD1Q6ZMY3 1216 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 HEATR4Q86WZ0 1026 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 SLC5A5Q92911 643 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 GCNAQ96QF7 691 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 MXRA8Q9BRK3 442 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 MCM8Q9UJA3 840 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 TBX20Q9UMR3 447 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PKP3Q9Y446 797 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 SOAT2O75908 522 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 UNC5CO95185 931 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 TPP2P29144 1249 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 GSTT1P30711 240 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RGS4P49798 205 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 APPL2Q8NEU8 664 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 TCF7L2Q9NQB0 619 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 NINJ2Q9NZG7 142 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 TJP2Q9UDY2 1190 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 HEATR9A2RTY3 570 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PDE2AO00408 941 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 RAD23AP54725 363 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 C21orf59P57076 290 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 GIT2Q14161 759 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 ARMCX4Q5H9R4 360 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 DCUN1D5Q9BTE7 237 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 DCLK3Q9C098 648 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 LRRC40Q9H9A6 602 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
CLTCL1-209ENST00000617103 MED24O75448 989 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 GSNP06396 782 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 OCM2P0CE71 109 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 OCMP0CE72 109 aaPredicted RBP11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 CYP2C8P10632 490 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 RAG1P15918 1043 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 FASP25445 335 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 CDC25CP30307 473 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 CDK16Q00536 496 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms