RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	GLUD1	P00367	558 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	CYLC1	P35663	651 aa	Predicted RBP	24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	PDCL	Q13371	301 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	PMF1	Q6P1K2	205 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	STK32A	Q8WU08	396 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	SLC22A17	Q8WUG5	538 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	CPA5	Q8WXQ8	436 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	UBXN6	Q9BZV1	441 aa		24.31	■■□□□ 1.48
ACACA-238	ENST00000616352	DENND4C	Q5VZ89	1909 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	EIF3CL	B5ME19	914 aa	Known RBP	24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	HHLA1	C9JL84	531 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	GRIK1	P39086	918 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	RPL34	P49207	117 aa	Known RBP	24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	SLC8A3	P57103	927 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	DUSP6	Q16828	381 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	MGAT5B	Q3V5L5	792 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	ACAD10	Q6JQN1	1059 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	ALKBH5	Q6P6C2	394 aa	Known RBP	24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	PIGZ	Q86VD9	579 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	C8orf48	Q96LL4	319 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	EIF3C	Q99613	913 aa	Known RBP	24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	SEPT5	Q99719	369 aa	Predicted RBP	24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	ISCU	Q9H1K1	167 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	CYP4F11	Q9HBI6	524 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	PNPLA8	Q9NP80	782 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	LMCD1	Q9NZU5	365 aa		24.3	■■□□□ 1.48
ACACA-238	ENST00000616352	OBSL1	O75147	1896 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	TRIM66	O15016	1216 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	PER2	O15055	1255 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	NRDC	O43847	1150 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	SOAT2	O75908	522 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	SPATA31D3	P0C874	917 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	TUFM	P49411	452 aa	Known RBP	24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	PTPN20	Q4JDL3	420 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	ZNF697	Q5TEC3	545 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	SPATA31D4	Q6ZUB0	917 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	SLC4A5	Q9BY07	1137 aa		24.29	■■□□□ 1.48
ACACA-238	ENST00000616352	GABBR2	O75899	941 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	GPR15	P49685	360 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	DDR2	Q16832	855 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	RBM23	Q86U06	439 aa	Known RBP	24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	PHF13	Q86YI8	300 aa	Predicted RBP	24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	SCN4B	Q8IWT1	228 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	KREMEN2	Q8NCW0	462 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	KCTD13	Q8WZ19	329 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	HSFY1	Q96LI6	401 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	CPXM1	Q96SM3	734 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	TLE6	Q9H808	572 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	CYLD	Q9NQC7	956 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	YIPF1	Q9Y548	306 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	TMCO5B	A8MYB1	307 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	RTN2	O75298	545 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	ATF6	P18850	670 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	MMP8	P22894	467 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	ELF1	P32519	619 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	NSF	P46459	744 aa	Known RBP	24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	CCDC122	Q5T0U0	273 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	DNAAF5	Q86Y56	855 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	SPATA17	Q96L03	361 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	NOX5	Q96PH1	765 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	NSUN3	Q9H649	340 aa	Known RBP	24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	HCFC2	Q9Y5Z7	792 aa		24.28	■■□□□ 1.48
ACACA-238	ENST00000616352	ANAPC1	Q9H1A4	1944 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	FAM170A	A1A519	330 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	PRRG1	O14668	218 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	TNFRSF10B	O14763	440 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	FTL	P02792	175 aa	Predicted RBP	24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	EPCAM	P16422	314 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	POU3F3	P20264	500 aa	Predicted RBP	24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	NRIP1	P48552	1158 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	RGS7	P49802	495 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	RPL10A	P62906	217 aa	Known RBP	24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	PTP4A2	Q12974	167 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	KCNC3	Q14003	757 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	RAB41	Q5JT25	222 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	PPP1R2P3	Q6NXS1	205 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	MON1B	Q7L1V2	547 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	GPRIN1	Q7Z2K8	1008 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	TMEM110	Q86TL2	294 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	PPP1R13B	Q96KQ4	1090 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	CEP295NL	Q96MC4	621 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	CDCA3	Q99618	268 aa	Predicted RBP	24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	TJP2	Q9UDY2	1190 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	REXO2	Q9Y3B8	237 aa	Known RBP	24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	INSL5	Q9Y5Q6	135 aa		24.27	■■□□□ 1.48
ACACA-238	ENST00000616352	C2orf16	Q68DN1	1984 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	ADGRE1	Q14246	886 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	SDHAF4	Q5VUM1	108 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	GPR153	Q6NV75	609 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	TOGARAM2	Q6ZUX3	1019 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	ERICH1	Q86X53	443 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	SLC7A14	Q8TBB6	771 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	PLEKHA4	Q9H4M7	779 aa		24.26	■■□□□ 1.47
ACACA-238	ENST00000616352	BRWD1	Q9NSI6	2320 aa		24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	GABRB2	P47870	512 aa		24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	C1QBP	Q07021	282 aa	Known RBP	24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	CCDC149	Q6ZUS6	474 aa		24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	RTL10	Q7L3V2	364 aa		24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	HDAC7	Q8WUI4	952 aa		24.25	■■□□□ 1.47
ACACA-238	ENST00000616352	PPP2R3C	Q969Q6	453 aa		24.25	■■□□□ 1.47

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms