RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CDH9Q9ULB4 789 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 PPP2R2CQ9Y2T4 447 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 USP15Q9Y4E8 981 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 DENND4CQ5VZ89 1909 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ANAPC1Q9H1A4 1944 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 LOC730098B7Z3J9 87 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 M0QYV0 167 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 TRAPPC3O43617 180 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 GPR37L1O60883 481 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CLASP2O75122 1294 aaKnown RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 BEST1O76090 585 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 SOD2P04179 222 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ALADP13716 330 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 HOXB8P17481 243 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 RPL17P18621 184 aaKnown RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 COL9A1P20849 921 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ADORA2BP29275 332 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CDH5P33151 784 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ARHGAP25P42331 645 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CENPCQ03188 943 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ELAVL2Q12926 359 aaKnown RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 PTP4A2Q12974 167 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CNGA2Q16280 664 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 C2CD6Q53TS8 623 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CCDC122Q5T0U0 273 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ZNF280DQ6N043 979 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ALKBH5Q6P6C2 394 aaKnown RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 TTC9BQ8N6N2 239 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 SLC2A14Q8TDB8 520 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 SLC22A17Q8WUG5 538 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CPA5Q8WXQ8 436 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CASP10Q92851 521 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ARHGEF26Q96DR7 871 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 PCED1BQ96HM7 432 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 TNIP3Q96KP6 325 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ACBD6Q9BR61 282 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 LRFN3Q9BTN0 628 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ZNF518BQ9C0D4 1074 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 LACRTQ9GZZ8 138 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ZCWPW1Q9H0M4 648 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 ISCUQ9H1K1 167 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 CHST7Q9NS84 486 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 MTRRQ9UBK8 725 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 GTF3C4Q9UKN8 822 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 PCDHA13Q9Y5I0 950 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 HCFC2Q9Y5Z7 792 aa8.51□□□□□ -1.05
PCDH9-205ENST00000614931 BDP1A6H8Y1 2624 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 ARHGEF37A1IGU5 675 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 C2CD2LO14523 706 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 DCXO43602 365 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 NRDCO43847 1150 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 LILRB3O75022 631 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 RTN2O75298 545 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PCSK1P29120 753 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 GPD2P43304 727 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 MAGEA1P43355 309 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 GLUD2P49448 558 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 VAV2P52735 878 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 GALCP54803 685 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 DSG1Q02413 1049 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PDE4CQ08493 712 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PSMD5Q16401 504 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 USP41Q3LFD5 358 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PTPN20Q4JDL3 420 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CTXN3Q4LDR2 81 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 SLC39A12Q504Y0 691 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 TMEM31Q5JXX7 168 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 ACAD10Q6JQN1 1059 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 MON1BQ7L1V2 547 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CCAR2Q8N163 923 aaKnown RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 ZMIZ2Q8NF64 920 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 MYCBPAPQ8TBZ2 947 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 SECISBP2LQ93073 1101 aaKnown RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PPP1R13BQ96KQ4 1090 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 SMOQ99835 787 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CLSTN3Q9BQT9 956 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 C11orf70Q9BRQ4 267 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 PHF7Q9BWX1 381 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 KRT82Q9NSB4 513 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 TRMT1Q9NXH9 659 aaKnown RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 CHORDC1Q9UHD1 332 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-205ENST00000614931 KIAA1257Q9ULG3 409 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 DUSP10Q9Y6W6 482 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 NCANO14594 1321 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 ATP8B3O60423 1300 aa8.5□□□□□ -1.05
PCDH9-205ENST00000614931 NCOR1O75376 2440 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 WDR27A2RRH5 827 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MTMR11A4FU01 709 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 OR6C75A6NL08 312 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms