RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 KIF20AO95235 890 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 RETP07949 1114 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 PDGFRBP09619 1106 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 SLFN14P0C7P3 912 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 BDNFP23560 247 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 LMO2P25791 158 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 AFMP43652 599 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 FNTBP49356 437 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 WDR5BQ86VZ2 330 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 OR6B3Q8NGW1 331 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 MYCBPAPQ8TBZ2 947 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 ELOVL4Q9GZR5 314 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 SLC39A2Q9NP94 309 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 HPS4Q9NQG7 708 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 DUS2Q9NX74 493 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 TRPM5Q9NZQ8 1165 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
PDLIM2-218ENST00000614502 K7ESF4 209 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ATP2C2O75185 946 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 TADA3O75528 432 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 KRT37O76014 449 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 HDCP19113 662 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 TRIM21P19474 475 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 NOP14P78316 857 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 USP4Q13107 963 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF77Q15935 545 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 CEP68Q76N32 757 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 PCED1BQ96HM7 432 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 TNIP3Q96KP6 325 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 SLITRK1Q96PX8 696 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 TTLL2Q9BWV7 592 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ECT2Q9H8V3 914 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 CRTAC1Q9NQ79 661 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 KIAA1549LQ6ZVL6 1849 aa12.95□□□□□ -0.34
PDLIM2-218ENST00000614502 A8MXQ7 604 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 CLSTN1O94985 981 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 NFATC1O95644 943 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 P4HA1P13674 534 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 PTPN1P18031 435 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 BIRC3Q13489 604 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 CUL4BQ13620 913 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 MDH1BQ5I0G3 518 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 TRIM68Q6AZZ1 485 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 SLC9A9Q8IVB4 645 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 CAMKK1Q8N5S9 505 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 PDZD8Q8NEN9 1154 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 CD101Q93033 1021 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 RTKNQ9BST9 563 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 GCNT4Q9P109 453 aa12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-218ENST00000614502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 PDXKO00764 312 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 HCRTO43612 131 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 GDF9O60383 454 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 AKAP3O75969 853 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 ARSAP15289 507 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 CMA1P23946 247 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 GJA4P35212 333 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 GALK1P51570 392 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 EML3Q32P44 896 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 FSTL4Q6MZW2 842 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 SH3RF2Q8TEC5 729 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 ACDQ96AP0 544 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 LOXL4Q96JB6 756 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 CYP2S1Q96SQ9 504 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms