RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.596e-7■■■■□ 26.7
SENP3-EIF4A1-201ENST00000614237 ENDOD1O94919 500 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 GHRP10912 638 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ATF2P15336 505 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CCND1P24385 295 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CDKN2BP42772 138 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 MPP2Q14168 576 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ITIH4Q14624 930 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SMAD1Q15797 465 aaKnown RBP11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CYP4X1Q8N118 509 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 MCRS1Q96EZ8 462 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TTC25Q96NG3 672 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 MYLK2Q9H1R3 596 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CDT1Q9H211 546 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SIX4Q9UIU6 781 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 hCG_1818297A0A087WSY0 165 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CFAP69A5D8W1 941 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 C2orf71A6NGG8 1288 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CCDC160A6NGH7 325 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 HMGCRP04035 888 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PHKA2P46019 1235 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CDC42EP1Q00587 391 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC25A11Q02978 314 aaKnown RBP11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 NR1H3Q13133 447 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 STAT4Q14765 748 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TFDP3Q5H9I0 405 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SPOCD1Q6ZMY3 1216 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC35B2Q8TB61 432 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SYT15Q9BQS2 421 aa11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 R3HDM2Q9Y2K5 976 aaKnown RBP11.38□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RASA4BC9J798 803 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ADM5C9JUS6 153 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RASA4O43374 803 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 STRNO43815 780 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ITGA8P53708 1063 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC8A3P57103 927 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TRPC3Q13507 836 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ZNF699Q32M78 642 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PCGF5Q86SE9 256 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ELP3Q9H9T3 547 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CILPO75339 1184 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 KRT7P08729 469 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SERPINB4P48594 390 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 GRIK3Q13003 919 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 STILQ15468 1287 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 EFCAB12Q6NXP0 572 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 DNAJC24Q6P3W2 148 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TFAP2BQ92481 460 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 EBF2Q9HAK2 575 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 NPHS2Q9NP85 383 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 UBN1Q9NPG3 1134 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ANAPC5Q9UJX4 755 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC12A4Q9UP95 1085 aa11.37□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 IFNB1P01574 187 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 INHBEP58166 350 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CCNJLQ8IV13 435 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CMASQ8NFW8 434 aaPredicted RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 MIS12Q9H081 205 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 VPS37BQ9H9H4 285 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ARL2BPQ9Y2Y0 163 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 CFAP73A6NFT4 308 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 VCPP55072 806 aaKnown RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RPL7AP62424 266 aaKnown RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 OGDHQ02218 1023 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ARCQ7LC44 396 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PCDH9Q9HC56 1237 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SSU72Q9NP77 194 aaKnown RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SHOC2Q9UQ13 582 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 FAM155BO75949 473 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 TXNP10599 105 aaKnown RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 VDRP11473 427 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PLCB3Q01970 1234 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SLC4A11Q8NBS3 891 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 PDZD7Q9H5P4 517 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 NINJ2Q9NZG7 142 aa11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 IQCF3P0C7M6 154 aa11.35□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 P4HA1P13674 534 aa11.35□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 RPL34P49207 117 aaKnown RBP11.35□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 SCARA3Q6AZY7 606 aa11.35□□□□□ -0.59
SENP3-EIF4A1-201ENST00000614237 BBS12Q6ZW61 710 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms