RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 LAMP2P13473 410 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 KRT5P13647 590 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 USP46P62068 366 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 CLEC20AQ6ZU45 233 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 DENND5BQ6ZUT9 1274 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 NPAS3Q8IXF0 933 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 NUP93Q8N1F7 819 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 TFAP2BQ92481 460 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 SHC3Q92529 594 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 MCRS1Q96EZ8 462 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 TRMT2BQ96GJ1 504 aaKnown RBP17.6■□□□□ 0.41
IRF1-211ENST00000613424 MYRFLQ96LU7 910 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 COL25A1Q9BXS0 654 aaPredicted RBP17.6■□□□□ 0.41
IRF1-211ENST00000613424 ATXN3LQ9H3M9 355 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 PLCB1Q9NQ66 1216 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 RTN4Q9NQC3 1192 aaKnown RBP17.6■□□□□ 0.41
IRF1-211ENST00000613424 EPS15L1Q9UBC2 864 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 UXTQ9UBK9 157 aaPredicted RBP17.6■□□□□ 0.41
IRF1-211ENST00000613424 LIMD1Q9UGP4 676 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 SIK3Q9Y2K2 1263 aa17.6■□□□□ 0.41
IRF1-211ENST00000613424 ZFP37Q9Y6Q3 630 aaPredicted RBP17.6■□□□□ 0.41
IRF1-211ENST00000613424 FOXN3O00409 490 aaPredicted RBP17.59■□□□□ 0.41
IRF1-211ENST00000613424 TNFRSF10BO14763 440 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 TEX33O43247 280 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 UCHL3P15374 230 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 ZNF445P59923 1031 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 SYCP1Q15431 976 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 TEAD2Q15562 447 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 TMEM150AQ86TG1 271 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 ANKRD52Q8NB46 1076 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
IRF1-211ENST00000613424 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
IRF1-211ENST00000613424 GDE1Q9NZC3 331 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 FHOD1Q9Y613 1164 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 DOCK8Q8NF50 2099 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 MYH10P35580 1976 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
IRF1-211ENST00000613424 HHLA1C9JL84 531 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 SERPINC1P01008 464 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 NPR3P17342 541 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.4
IRF1-211ENST00000613424 CDC25CP30307 473 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 USP8P40818 1118 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 DRAP1Q14919 205 aaPredicted RBP17.58■□□□□ 0.4
IRF1-211ENST00000613424 CNGA2Q16280 664 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 FILIP1LQ4L180 1135 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 TTC30AQ86WT1 665 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 RNF135Q8IUD6 432 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 SCAMP5Q8TAC9 235 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 ZSWIM3Q96MP5 696 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 ERGIC2Q96RQ1 377 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 ZSWIM1Q9BR11 485 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 TTLL2Q9BWV7 592 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 GANQ9H2C0 597 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 IL37Q9NZH6 218 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 EHD2Q9NZN4 543 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 TSPAN16Q9UKR8 245 aa17.58■□□□□ 0.4
IRF1-211ENST00000613424 MUC3AQ02505 3323 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 A0A1B0GTH6 734 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 O00370 1275 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
IRF1-211ENST00000613424 RFX1P22670 979 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 SLC5A3P53794 718 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 CYP4F8P98187 520 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 FANCCQ00597 558 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 RAPGEF1Q13905 1077 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 GOLGA7BQ2TAP0 167 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 STXBP5Q5T5C0 1151 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 SMYD5Q6GMV2 418 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 LCLAT1Q6UWP7 414 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 ST13P5Q8NFI4 369 aaPredicted RBP17.57■□□□□ 0.4
IRF1-211ENST00000613424 UBA3Q8TBC4 463 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 PCMTD1Q96MG8 357 aaPredicted RBP17.57■□□□□ 0.4
IRF1-211ENST00000613424 GCNAQ96QF7 691 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 STK33Q9BYT3 514 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 GPR88Q9GZN0 384 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 ACP6Q9NPH0 428 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 FAM207AQ9NSI2 230 aaPredicted RBP17.57■□□□□ 0.4
IRF1-211ENST00000613424 HESX1Q9UBX0 185 aa17.57■□□□□ 0.4
IRF1-211ENST00000613424 EPHB6O15197 1021 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 CYP26A1O43174 497 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 TADA3O75528 432 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
IRF1-211ENST00000613424 YWHAQP27348 245 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 POLR2FP61218 127 aaKnown RBP17.56■□□□□ 0.4
IRF1-211ENST00000613424 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
IRF1-211ENST00000613424 NR1I3Q14994 352 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 STILQ15468 1287 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 PTPN21Q16825 1174 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 ARHGAP15Q53QZ3 475 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 GPR158Q5T848 1215 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 FAM71AQ8IYT1 594 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 NEK11Q8NG66 645 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 UBXN6Q9BZV1 441 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 KCNK12Q9HB15 430 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 PNPLA8Q9NP80 782 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 COMMD8Q9NX08 183 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 MYO10Q9HD67 2058 aa17.56■□□□□ 0.4
IRF1-211ENST00000613424 ANHXE9PGG2 379 aa17.55■□□□□ 0.4
IRF1-211ENST00000613424 ASGR2P07307 311 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms