RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 ARL14EPQ8N8R7 260 aaPredicted RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 OSCP1Q8WVF1 389 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 SECISBP2LQ93073 1101 aaKnown RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 EXOC4Q96A65 974 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 CCDC34Q96HJ3 373 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 SLC22A12Q96S37 553 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 CYP2S1Q96SQ9 504 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 TTLL2Q9BWV7 592 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 SMYD3Q9H7B4 428 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 GCNT4Q9P109 453 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 NCDNQ9UBB6 729 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 SMG5Q9UPR3 1016 aaKnown RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 TRAF3IP3Q9Y228 551 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 EP300Q09472 2414 aaPredicted RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 ATP8B3O60423 1300 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 C2orf78A6NCI8 922 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 PRR29P0C7W0 189 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 TCF3P15923 654 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 IFNAR2P48551 515 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 USP46P62068 366 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRKN-209ENST00000612485 DPYDQ12882 1025 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 USP4Q13107 963 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 SGSM1Q2NKQ1 1148 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 Q6ZS52 159 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 CPA6Q8N4T0 437 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 TTC16Q8NEE8 873 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 RIN3Q8TB24 985 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 TNIP3Q96KP6 325 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 ZNF518BQ9C0D4 1074 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 DUS2Q9NX74 493 aaKnown RBP18.48■□□□□ 0.55
PRKN-209ENST00000612485 ARHGAP26Q9UNA1 814 aa18.48■□□□□ 0.55
PRKN-209ENST00000612485 PTPRDP23468 1912 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 TRDMT1O14717 391 aaKnown RBP18.47■□□□□ 0.55
PRKN-209ENST00000612485 IKBKBO14920 756 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 MAPK13O15264 365 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 VNN1O95497 513 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 ARSAP15289 507 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 CDH8P55286 799 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 DLG4P78352 724 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 NFIL3Q16649 462 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 ZACNQ401N2 412 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 TMEM196Q5HYL7 178 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 KIAA2013Q8IYS2 634 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 SH3RF2Q8TEC5 729 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 TAF4BQ92750 862 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 ATP2A3Q93084 1043 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 B3GNT5Q9BYG0 378 aa18.47■□□□□ 0.55
PRKN-209ENST00000612485 OTOGLQ3ZCN5 2332 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 ZNF840PA6NDX5 716 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 OTOL1A6NHN0 477 aaPredicted RBP18.46■□□□□ 0.55
PRKN-209ENST00000612485 CLDN5O00501 218 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 ZNF202O95125 648 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 NR2F2P24468 414 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 ID4P47928 161 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 BECN1Q14457 450 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 SV2AQ7L0J3 742 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 DCLK2Q8N568 766 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 SLITRK1Q96PX8 696 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 GOLPH3LQ9H4A5 285 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 ECT2Q9H8V3 914 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 RAB23Q9ULC3 237 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 GREB1Q4ZG55 1949 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 ZNF292O60281 2723 aa18.46■□□□□ 0.55
PRKN-209ENST00000612485 WDR87Q6ZQQ6 2873 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 K7ESF4 209 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 ATG13O75143 517 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 RTN3O95197 1032 aaPredicted RBP18.45■□□□□ 0.54
PRKN-209ENST00000612485 DRD1P21728 446 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 RPL13P26373 211 aaKnown RBP18.45■□□□□ 0.54
PRKN-209ENST00000612485 GJA4P35212 333 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 VAMP7P51809 220 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 CACNA2D1P54289 1103 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 TAF10Q12962 218 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 NR1H3Q13133 447 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 FSTL4Q6MZW2 842 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 INTS8Q75QN2 995 aaKnown RBP18.45■□□□□ 0.54
PRKN-209ENST00000612485 LONP2Q86WA8 852 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 NUP93Q8N1F7 819 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 GUF1Q8N442 669 aaKnown RBP18.45■□□□□ 0.54
PRKN-209ENST00000612485 GPR161Q8N6U8 529 aaKnown RBP18.45■□□□□ 0.54
PRKN-209ENST00000612485 GMEB2Q9UKD1 530 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 WNT6Q9Y6F9 365 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 ANAPC1Q9H1A4 1944 aa18.45■□□□□ 0.54
PRKN-209ENST00000612485 FRYLO94915 3013 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 CHURC1-FNTBB4DL54 471 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 ABL1P00519 1130 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 KRT13P13646 458 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 TRIM21P19474 475 aaKnown RBP18.44■□□□□ 0.54
PRKN-209ENST00000612485 YWHAQP27348 245 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 CNR2P34972 360 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 PIK3CAP42336 1068 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 FNTBP49356 437 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 SLC7A9P82251 487 aa18.44■□□□□ 0.54
PRKN-209ENST00000612485 ENPEPQ07075 957 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms