RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RASA4BC9J798 803 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 RASA4O43374 803 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 IGHA2P01877 340 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 CYP2C9P11712 490 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 FAM187BQ17R55 369 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 RNASEH2BQ5TBB1 312 aaKnown RBP15.43■□□□□ 0.06
CDH1-213ENST00000612417 TRABD2AQ86V40 505 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
CDH1-213ENST00000612417 EGFL6Q8IUX8 553 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 CCDC63Q8NA47 563 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 GRAMD1AQ96CP6 724 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 CDT1Q9H211 546 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 SAYSD1Q9NPB0 183 aa15.43■□□□□ 0.06
CDH1-213ENST00000612417 EXOC1LA0A1B0GW35 172 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 FAM47DPA6NHR8 397 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 PRPF4O43172 522 aaKnown RBP eCLIP15.42■□□□□ 0.06
CDH1-213ENST00000612417 DUSP11O75319 330 aaKnown RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 PECAM1P16284 738 aaPredicted RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 SP3Q02447 781 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 GPS1Q13098 491 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 MTFR1Q15390 333 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 ERICH1Q86X53 443 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 SLC35B2Q8TB61 432 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 KATNAL1Q9BW62 490 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 FRMD8P1Q9BZ68 369 aaPredicted RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 XYLT2Q9H1B5 865 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 CD248Q9HCU0 757 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 SENP1Q9P0U3 644 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 C3orf70A6NLC5 250 aaPredicted RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 ALOX15BO15296 676 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 UBOX5O94941 541 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 ASPAP45381 313 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 GSCP56915 257 aaPredicted RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 TFAMQ00059 246 aaKnown RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 RIPK1Q13546 671 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 ZFYVE27Q5T4F4 411 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 TXNRD3NBQ6F5E7 133 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 C7orf31Q8N865 590 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 GDAP1Q8TB36 358 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 TFAP2BQ92481 460 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 LHX5Q9H2C1 402 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 RPF1Q9H9Y2 349 aaKnown RBP15.42■□□□□ 0.06
CDH1-213ENST00000612417 MLXIPLQ9NP71 852 aa15.42■□□□□ 0.06
CDH1-213ENST00000612417 DNAH12Q6ZR08 3092 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 GPR25O00155 361 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 B4GALT4O60513 344 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 ZSCAN5DPP0CG00 497 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 CYBAP13498 195 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
CDH1-213ENST00000612417 TAC1P20366 129 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 IL9RQ01113 521 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 SATB1Q01826 763 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 BNIP1Q12981 228 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 TRIM32Q13049 653 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 TRPC3Q13507 836 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 TMED2Q15363 201 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 TAZQ16635 292 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 AMHR2Q16671 573 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 ZNF699Q32M78 642 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 FAM133BQ5BKY9 247 aaKnown RBP15.41■□□□□ 0.06
CDH1-213ENST00000612417 WLSQ5T9L3 541 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 RNF43Q68DV7 783 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 RGS9BPQ6ZS82 235 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
CDH1-213ENST00000612417 FAXDC2Q96IV6 333 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 GCOM2Q9BZD3 368 aaPredicted RBP15.41■□□□□ 0.06
CDH1-213ENST00000612417 PDZD7Q9H5P4 517 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 RXFP1Q9HBX9 757 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 AGAP1Q9UPQ3 857 aa15.41■□□□□ 0.06
CDH1-213ENST00000612417 SMIM35A0A1B0GVV1 85 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 MYADML2A6NDP7 307 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SIGLEC16A6NMB1 481 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 HAS3O00219 553 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 TREHO43280 583 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 TRPA1O75762 1119 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 ASMTLO95671 621 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 PGK1P00558 417 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 POLR2BP30876 1174 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 WDR4P57081 412 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 NCALDP61601 193 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 ZNF200P98182 395 aaPredicted RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 PURAQ00577 322 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 CDC42EP1Q00587 391 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SLC25A11Q02978 314 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 CGB2Q6NT52 195 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 CENPUQ71F23 418 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 PCGF5Q86SE9 256 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms