RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MAGED2Q9UNF1 606 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 QSER1Q2KHR3 1735 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 E5RJQ4 531 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 M0QYV0 167 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 MCF2LO15068 1137 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ABHD2P08910 425 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TPBGLP0DKB5 382 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 STXBP2Q15833 593 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 HADHQ16836 314 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 SLC25A41Q8N5S1 370 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ARMC2Q8NEN0 867 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 STK32AQ8WU08 396 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 VCPIP1Q96JH7 1222 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CLPTM1LQ96KA5 538 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 HEXIM2Q96MH2 286 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CYTH2Q99418 400 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ACAD9Q9H845 621 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 SHOC2Q9UQ13 582 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ACTL7BQ9Y614 415 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 THSD7AQ9UPZ6 1657 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TCRBV9S1A1TA0A576 114 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TRIM49D1C9J1S8 452 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 RNF8O76064 485 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 LDHAP00338 332 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 ENO1P06733 434 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 F7P08709 466 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 KDELR1P24390 212 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TCF7P36402 384 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CLCN3P51790 818 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 OR6B2Q6IFH4 312 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 AGGF1Q8N302 714 aaeCLIP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 RIBC1Q8N443 379 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 FAXDC2Q96IV6 333 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 TEX13BQ9BXU2 312 aa14.7□□□□□ -0.06
COL6A1-207ENST00000612273 CADM1Q9BY67 442 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.7□□□□□ -0.06
COL6A1-207ENST00000612273 KCNN4O15554 427 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 PRPF4O43172 522 aaKnown RBP eCLIP14.69□□□□□ -0.069e-6■□□□□ 10.5
COL6A1-207ENST00000612273 ERBB2P04626 1255 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 PRKCBP05771 671 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 ESRRAP11474 423 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-207ENST00000612273 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
COL6A1-207ENST00000612273 DOCK5Q9H7D0 1870 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 PGAP2Q9UHJ9 254 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 PGK2P07205 417 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 MXRA7P84157 204 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 MROH9Q5TGP6 573 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 C12orf29Q8N999 325 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 FBXO27Q8NI29 283 aa14.69□□□□□ -0.06
COL6A1-207ENST00000612273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.063e-6■■■□□ 18.4
COL6A1-207ENST00000612273 PPARGC1AQ9UBK2 798 aaKnown RBP14.69□□□□□ -0.06
COL6A1-207ENST00000612273 MYH9P35579 1960 aaKnown RBP14.69□□□□□ -0.06
COL6A1-207ENST00000612273 ADCY3O60266 1144 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ITGAVP06756 1048 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 UBA1P22314 1058 aaKnown RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 GMPRP36959 345 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 TUBP50607 506 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 EFHC2Q5JST6 749 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ARID3BQ8IVW6 561 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 PDCD7Q8N8D1 485 aaKnown RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 WDR60Q8WVS4 1066 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 RILPQ96NA2 401 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 SLC17A6Q9P2U8 582 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 CXorf49A8MYA2 514 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 SPATA31C2B4DYI2 1134 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 H0YCG3 227 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 H3BRJ5 948 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ITGB3P05106 788 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 RASSF2P50749 326 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 CRADDP78560 199 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 TMPRSS15P98073 1019 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 DPYSL3Q14195 570 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 LRRC36Q1X8D7 754 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ZC3H12AQ5D1E8 599 aaKnown RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 BRSK2Q8IWQ3 736 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 CCDC110Q8TBZ0 833 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 TMEM174Q8WUU8 243 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 NKD2Q969F2 451 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-207ENST00000612273 ADPGKQ9BRR6 497 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 NMUR2Q9GZQ4 415 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 USP18Q9UMW8 372 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 SNCAIPQ9Y6H5 919 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 COL4A5P29400 1685 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 CAPN9O14815 690 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 PLSCR1O15162 318 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 PTPRAP18433 802 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 MCL1Q07820 350 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 SGSM1Q2NKQ1 1148 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 HSDL1Q3SXM5 330 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 RINLQ6ZS11 566 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 NAT8LQ8N9F0 302 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 UCMAQ8WVF2 138 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 COPS5Q92905 334 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 PCYT2Q99447 389 aa14.68□□□□□ -0.06
COL6A1-207ENST00000612273 CEP41Q9BYV8 373 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms