RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 C19orf67A6NJJ6 358 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 TPM3P06753 285 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 SSTR3P32745 418 aaPredicted RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 PPP3CCP48454 512 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 UBASH3AP57075 661 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 BPIFB4P59827 614 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 PTK2Q05397 1052 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 DRAP1Q14919 205 aaPredicted RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 CNGA2Q16280 664 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 SLC5A9Q2M3M2 681 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ARHGAP15Q53QZ3 475 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 DPY19L2P1Q6NXN4 242 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 LCLAT1Q6UWP7 414 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 CLEC20AQ6ZU45 233 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ZDHHC14Q8IZN3 488 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 GJD3Q8N144 294 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ITFG1Q8TB96 612 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 FGF13Q92913 245 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 UHRF1Q96T88 793 aaPredicted RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 SMOQ99835 787 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 NAA15Q9BXJ9 866 aaKnown RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 UBXN6Q9BZV1 441 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ZNF334Q9HCZ1 680 aaPredicted RBP15.09■□□□□ 0.01
CTSA-219ENST00000607841 EPS15L1Q9UBC2 864 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 ZMYM5Q9UJ78 669 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 TSPAN16Q9UKR8 245 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 FHOD1Q9Y613 1164 aa15.09■□□□□ 0.01
CTSA-219ENST00000607841 A0A1W2PQC6 194 aa15.08■□□□□ 0
CTSA-219ENST00000607841 A0A1W2PRU2 124 aa15.08■□□□□ 0
CTSA-219ENST00000607841 C2CD4DB7Z1M9 353 aa15.08■□□□□ 0
CTSA-219ENST00000607841 O00370 1275 aa15.08■□□□□ 0
CTSA-219ENST00000607841 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
CTSA-219ENST00000607841 TEX33O43247 280 aa15.08■□□□□ 0
CTSA-219ENST00000607841 LAMP2P13473 410 aa15.08■□□□□ 0
CTSA-219ENST00000607841 SP100P23497 879 aaPredicted RBP15.08■□□□□ 0
CTSA-219ENST00000607841 YWHAQP27348 245 aa15.08■□□□□ 0
CTSA-219ENST00000607841 GNA15P30679 374 aa15.08■□□□□ 0
CTSA-219ENST00000607841 CCR2P41597 374 aa15.08■□□□□ 0
CTSA-219ENST00000607841 KLK7P49862 253 aa15.08■□□□□ 0
CTSA-219ENST00000607841 BCAT1P54687 386 aa15.08■□□□□ 0
CTSA-219ENST00000607841 POLR2FP61218 127 aaKnown RBP15.08■□□□□ 0
CTSA-219ENST00000607841 NR1I3Q14994 352 aa15.08■□□□□ 0
CTSA-219ENST00000607841 GOLGA7BQ2TAP0 167 aa15.08■□□□□ 0
CTSA-219ENST00000607841 RNF214Q8ND24 703 aa15.08■□□□□ 0
CTSA-219ENST00000607841 ZMIZ2Q8NF64 920 aa15.08■□□□□ 0
CTSA-219ENST00000607841 MRPS31Q92665 395 aaKnown RBP15.08■□□□□ 0
CTSA-219ENST00000607841 TCEAL4Q96EI5 215 aa15.08■□□□□ 0
CTSA-219ENST00000607841 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0
CTSA-219ENST00000607841 SLITRK1Q96PX8 696 aa15.08■□□□□ 0
CTSA-219ENST00000607841 SPAG5Q96R06 1193 aa15.08■□□□□ 0
CTSA-219ENST00000607841 MYADMQ96S97 322 aa15.08■□□□□ 0
CTSA-219ENST00000607841 TTLL2Q9BWV7 592 aa15.08■□□□□ 0
CTSA-219ENST00000607841 GANQ9H2C0 597 aa15.08■□□□□ 0
CTSA-219ENST00000607841 FBXO44Q9H4M3 255 aa15.08■□□□□ 0
CTSA-219ENST00000607841 TMEM30AQ9NV96 361 aa15.08■□□□□ 0
CTSA-219ENST00000607841 VCANP13611 3396 aa15.08■□□□□ 0
CTSA-219ENST00000607841 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
CTSA-219ENST00000607841 SOBPA7XYQ1 873 aa15.07■□□□□ 0
CTSA-219ENST00000607841 CYP26A1O43174 497 aa15.07■□□□□ 0
CTSA-219ENST00000607841 THAP12O43422 761 aa15.07■□□□□ 0
CTSA-219ENST00000607841 BEST1O76090 585 aa15.07■□□□□ 0
CTSA-219ENST00000607841 SETSIPP0DME0 302 aa15.07■□□□□ 0
CTSA-219ENST00000607841 CEBPBP17676 345 aa15.07■□□□□ 0
CTSA-219ENST00000607841 BRD2P25440 801 aaKnown RBP15.07■□□□□ 0
CTSA-219ENST00000607841 DDX6P26196 483 aaKnown RBP eCLIP15.07■□□□□ 0
CTSA-219ENST00000607841 SLC5A3P53794 718 aa15.07■□□□□ 0
CTSA-219ENST00000607841 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
CTSA-219ENST00000607841 TEAD2Q15562 447 aa15.07■□□□□ 0
CTSA-219ENST00000607841 GAREM2Q75VX8 874 aa15.07■□□□□ 0
CTSA-219ENST00000607841 CACNA2D4Q7Z3S7 1137 aa15.07■□□□□ 0
CTSA-219ENST00000607841 NPAS3Q8IXF0 933 aa15.07■□□□□ 0
CTSA-219ENST00000607841 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
CTSA-219ENST00000607841 PDZD8Q8NEN9 1154 aa15.07■□□□□ 0
CTSA-219ENST00000607841 SHKBP1Q8TBC3 707 aa15.07■□□□□ 0
CTSA-219ENST00000607841 ING5Q8WYH8 240 aa15.07■□□□□ 0
CTSA-219ENST00000607841 TFAP2BQ92481 460 aa15.07■□□□□ 0
CTSA-219ENST00000607841 NXPE3Q969Y0 559 aa15.07■□□□□ 0
CTSA-219ENST00000607841 MCRS1Q96EZ8 462 aa15.07■□□□□ 0
CTSA-219ENST00000607841 SLITRK6Q9H5Y7 841 aa15.07■□□□□ 0
CTSA-219ENST00000607841 IL21Q9HBE4 155 aa15.07■□□□□ 0
CTSA-219ENST00000607841 TRPM5Q9NZQ8 1165 aa15.07■□□□□ 0
CTSA-219ENST00000607841 AJAP1Q9UKB5 411 aaPredicted RBP15.07■□□□□ 0
CTSA-219ENST00000607841 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
CTSA-219ENST00000607841 F8VZ95 297 aa15.06■□□□□ 0
CTSA-219ENST00000607841 TNFRSF10BO14763 440 aa15.06■□□□□ 0
CTSA-219ENST00000607841 XPO1O14980 1071 aaKnown RBP15.06■□□□□ 0
CTSA-219ENST00000607841 CBFA2T2O43439 604 aa15.06■□□□□ 0
CTSA-219ENST00000607841 MOSPD3O75425 235 aa15.06■□□□□ 0
CTSA-219ENST00000607841 F11P03951 625 aa15.06■□□□□ 0
CTSA-219ENST00000607841 GJA1P17302 382 aa15.06■□□□□ 0
CTSA-219ENST00000607841 STAT1P42224 750 aa15.06■□□□□ 0
CTSA-219ENST00000607841 USP46P62068 366 aa15.06■□□□□ 0
CTSA-219ENST00000607841 IFRD2Q12894 506 aaPredicted RBP15.06■□□□□ 0
CTSA-219ENST00000607841 MEA1Q16626 185 aa15.06■□□□□ 0
CTSA-219ENST00000607841 MTSS1LQ765P7 747 aa15.06■□□□□ 0
CTSA-219ENST00000607841 TTC30AQ86WT1 665 aa15.06■□□□□ 0
CTSA-219ENST00000607841 FMNL3Q8IVF7 1028 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms