RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 MMRN2Q9H8L6 949 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 TBC1D17Q9HA65 648 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 KIF9Q9HAQ2 790 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 DLGAP2Q9P1A6 1054 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
PRDM16-210ENST00000607632 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
PRDM16-210ENST00000607632 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 MIA3Q5JRA6 1907 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 P4HA2O15460 535 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 PI15O43692 258 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 GNA14O95837 355 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 ANXA13P27216 316 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 GDI1P31150 447 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 PPP3CCP48454 512 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 FMO5P49326 533 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 TCERG1LQ5VWI1 586 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 TXNDC8Q6A555 127 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 CELF5Q8N6W0 485 aaKnown RBP15.22■□□□□ 0.03
PRDM16-210ENST00000607632 FLCNQ8NFG4 579 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 HNRNPABQ99729 332 aaKnown RBP15.22■□□□□ 0.03
PRDM16-210ENST00000607632 NT5C1AQ9BXI3 368 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 BRD9Q9H8M2 597 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 DMAP1Q9NPF5 467 aaPredicted RBP15.22■□□□□ 0.03
PRDM16-210ENST00000607632 COMMD8Q9NX08 183 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
PRDM16-210ENST00000607632 KANSL1LA0AUZ9 987 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-210ENST00000607632 OLFM2O95897 454 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 GLULP15104 373 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 TCF15Q12870 199 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 NUP93Q8N1F7 819 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 ZNF687Q8N1G0 1237 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 UBR7Q8N806 425 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 MAB21L3Q8N8X9 362 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 C12orf29Q8N999 325 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 MLKLQ8NB16 471 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 PJA1Q8NG27 643 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 LMO3Q8TAP4 145 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 RIN3Q8TB24 985 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 OVCA2Q8WZ82 227 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 USP13Q92995 863 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-210ENST00000607632 TATDN2Q93075 761 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 KCNK16Q96T55 309 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 SMOQ99835 787 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 PNPLA8Q9NP80 782 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 TDP1Q9NUW8 608 aa15.21■□□□□ 0.03
PRDM16-210ENST00000607632 CACNA1HO95180 2353 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 ZNF263O14978 683 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 RTN3O95197 1032 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-210ENST00000607632 CCDC130P13994 396 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 AVPR1AP37288 418 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 STX17P56962 302 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 USP4Q13107 963 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 ORC1Q13415 861 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 SNX30Q5VWJ9 437 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 KIAA1958Q8N8K9 716 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 SLC2A14Q8TDB8 520 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 MSANTD3Q96H12 275 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 SLC22A12Q96S37 553 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 ARID3AQ99856 593 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 SRRTQ9BXP5 876 aaKnown RBP15.2■□□□□ 0.02
PRDM16-210ENST00000607632 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 LTB4R2Q9NPC1 389 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.022e-8■■■■■ 798.5
PRDM16-210ENST00000607632 HEBP1Q9NRV9 189 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 CCL26Q9Y258 94 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 F5P12259 2224 aa15.2■□□□□ 0.02
PRDM16-210ENST00000607632 MYH10P35580 1976 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 ZNF840PA6NDX5 716 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 HHLA1C9JL84 531 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 AP1G2O75843 785 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 BEST1O76090 585 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 CLSTN1O94985 981 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 FGFR1OPO95684 399 aaKnown RBP15.19■□□□□ 0.02
PRDM16-210ENST00000607632 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
PRDM16-210ENST00000607632 ZDHHC11BP0C7U3 371 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 SLC5A3P53794 718 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 RAD23BP54727 409 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 PTPN5P54829 565 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 FZD5Q13467 585 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 CUL2Q13617 745 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 ZNF77Q15935 545 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 ARHGAP17Q68EM7 881 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 RBM43Q6ZSC3 357 aaKnown RBP15.19■□□□□ 0.02
PRDM16-210ENST00000607632 CLEC20AQ6ZU45 233 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 TPRG1Q6ZUI0 275 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 SLC4A11Q8NBS3 891 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 PDZD8Q8NEN9 1154 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 GBP4Q96PP9 640 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms