RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 VITQ6UXI7 678 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 TRIM59Q8IWR1 403 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 YAF2Q8IY57 180 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 CMTM8Q8IZV2 173 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 CELF5Q8N6W0 485 aaKnown RBP20.4■□□□□ 0.86
SRSF4-206ENST00000605204 SEMA4DQ92854 862 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 MSANTD3Q96H12 275 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 SLITRK1Q96PX8 696 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 COMMD8Q9NX08 183 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 FAM186AA6NE01 2351 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 GVINP1Q7Z2Y8 2422 aa20.39■□□□□ 0.86
SRSF4-206ENST00000605204 RIF1Q5UIP0 2472 aaKnown RBP20.39■□□□□ 0.86
SRSF4-206ENST00000605204 ZNF263O14978 683 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 AOC1P19801 751 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 MLLT6P55198 1093 aaPredicted RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 STARD6P59095 220 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 PLCB2Q00722 1185 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 ZNF268Q14587 947 aaPredicted RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 MLF2Q15773 248 aaPredicted RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 FUKQ8N0W3 1084 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 PDZD8Q8NEN9 1154 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 OVCA2Q8WZ82 227 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 SRRTQ9BXP5 876 aaKnown RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 SLC46A2Q9BY10 475 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 PNPLA8Q9NP80 782 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 KRT82Q9NSB4 513 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 THG1LQ9NWX6 298 aaKnown RBP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 CA14Q9ULX7 337 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.39■□□□□ 0.85
SRSF4-206ENST00000605204 NCANO14594 1321 aa20.39■□□□□ 0.85
SRSF4-206ENST00000605204 KRBA1A5PL33 1030 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 PRR23AA6NEV1 266 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 PROB1E7EW31 1015 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 CHADO15335 359 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 MBD3O95983 291 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 GLULP15104 373 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 VIPR2P41587 438 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 STX17P56962 302 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 ARHGAP29Q52LW3 1261 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 NUP93Q8N1F7 819 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 FLCNQ8NFG4 579 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 SLC2A14Q8TDB8 520 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 BPIFB1Q8TDL5 484 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 HNRNPABQ99729 332 aaKnown RBP20.38■□□□□ 0.85
SRSF4-206ENST00000605204 PLA2G2FQ9BZM2 168 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 CSNK1G1Q9HCP0 422 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 CISHQ9NSE2 258 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 TRPM5Q9NZQ8 1165 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 HMGXB4Q9UGU5 601 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 MRPS17Q9Y2R5 130 aaKnown RBP20.38■□□□□ 0.85
SRSF4-206ENST00000605204 DMXL1Q9Y485 3027 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 DOCK6Q96HP0 2047 aa20.38■□□□□ 0.85
SRSF4-206ENST00000605204 TRAV19A0A0A6YYK7 116 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 CLDN5O00501 218 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 TADA3O75528 432 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 AP1G2O75843 785 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 FAM200BP0CF97 657 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 NPR3P17342 541 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 CD58P19256 250 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 ERCC5P28715 1186 aaPredicted RBP20.37■□□□□ 0.85
SRSF4-206ENST00000605204 GDI1P31150 447 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 NBL1P41271 181 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 CUL2Q13617 745 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 GRM2Q14416 872 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 SLC44A4Q53GD3 710 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 MAB21L3Q8N8X9 362 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 ST13P5Q8NFI4 369 aaPredicted RBP20.37■□□□□ 0.85
SRSF4-206ENST00000605204 ELMO3Q96BJ8 720 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 NELL2Q99435 816 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 DDX23Q9BUQ8 820 aaKnown RBP20.37■□□□□ 0.85
SRSF4-206ENST00000605204 OSBPL6Q9BZF3 934 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 IRF2BPLQ9H1B7 796 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 TBC1D17Q9HA65 648 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.37■□□□□ 0.854e-7■■■■■ 67.7
SRSF4-206ENST00000605204 TDP1Q9NUW8 608 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 COL4A3Q01955 1670 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 WDR87Q6ZQQ6 2873 aa20.37■□□□□ 0.85
SRSF4-206ENST00000605204 PRAMEF12O95522 483 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
SRSF4-206ENST00000605204 USP17L7P0C7H9 530 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 PAQR9Q6ZVX9 377 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 FAM114A1Q8IWE2 563 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 KIAA1958Q8N8K9 716 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 NT5C1BQ96P26 610 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 FBXO44Q9H4M3 255 aa20.36■□□□□ 0.85
SRSF4-206ENST00000605204 STK25O00506 426 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 MAN2B1O00754 1011 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 PI15O43692 258 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 CKMP06732 381 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 CCDC130P13994 396 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 YWHAQP27348 245 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 CACNA2D1P54289 1103 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 TPD52L1Q16890 204 aaPredicted RBP20.35■□□□□ 0.85
SRSF4-206ENST00000605204 TXNDC8Q6A555 127 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 SMYD5Q6GMV2 418 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 STKLD1Q8NE28 680 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 CSGALNACT1Q8TDX6 532 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 WHAMMQ8TF30 809 aa20.35■□□□□ 0.85
SRSF4-206ENST00000605204 CYFIP2Q96F07 1278 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms