RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 SIX1Q15475 284 aaPredicted RBP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 CDO1Q16878 200 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 ODF2Q5BJF6 829 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 KAZNQ674X7 775 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 DCLRE1AQ6PJP8 1040 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 DDX42Q86XP3 938 aaKnown RBP eCLIP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 TET1Q8NFU7 2136 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 EXD1Q8NHP7 514 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 CASKIN2Q8WXE0 1202 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 RAPGEF5Q92565 580 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 KHSRPQ92945 711 aaKnown RBP eCLIP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 CFAP57Q96MR6 1250 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 DUSP16Q9BY84 665 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 LCMT1Q9UIC8 334 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 C2CD4BA6NLJ0 364 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 ODC1P11926 461 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 KRT10P13645 584 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 HSPA6P17066 643 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 GPD1P21695 349 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 ATP11AP98196 1134 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 DR1Q01658 176 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 SNX1Q13596 522 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 TTC27Q6P3X3 843 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 PIGZQ86VD9 579 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 NDRG1Q92597 394 aaKnown RBP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 PCED1BQ96HM7 432 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 TRIM31Q9BZY9 425 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 DNAJB4Q9UDY4 337 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 NFU1Q9UMS0 254 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 PITPNM1O00562 1244 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 PHF2O75151 1096 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 RNF8O76064 485 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 KRT1P04264 644 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 OR1G1P47890 313 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 ZNF143P52747 638 aaPredicted RBP20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 MAP3K7CLP57077 242 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 SNX16P57768 344 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 CCDC137Q6PK04 289 aaKnown RBP20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 MFSD7Q6UXD7 560 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 RCOR2Q8IZ40 523 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 DIS3LQ8TF46 1054 aaKnown RBP20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 RSPH1Q8WYR4 309 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 FAM118BQ9BPY3 351 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 RTP3Q9BQQ7 232 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 TRIM51Q9BSJ1 452 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 OSBPL8Q9BZF1 889 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 HIPK3Q9H422 1215 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 TBC1D13Q9NVG8 400 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 PCDHB7Q9Y5E2 793 aa20.16■□□□□ 0.82
TUBB4B-202ENST00000604929 MIPP30301 263 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 TNNT3P45378 269 aaPredicted RBP20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 GATMP50440 423 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 SLC8A3P57103 927 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 SLC25A11Q02978 314 aaKnown RBP20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 TLE2Q04725 743 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 ADCY2Q08462 1091 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 FAAP100Q0VG06 881 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 TRIM60Q495X7 471 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 LRRC38Q5VT99 294 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 METTL23Q86XA0 190 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 URGCPQ8TCY9 931 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 ATG4AQ8WYN0 398 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 SEPT8Q92599 483 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 UROC1Q96N76 676 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 KCNK16Q96T55 309 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 ASNSD1Q9NWL6 643 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 TMEM161AQ9NX61 479 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 LRRD1A4D1F6 860 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 NPR3P17342 541 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CHRNA3P32297 505 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CYP2C18P33260 490 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 PLA2G4AP47712 749 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 HADHQ16836 314 aaKnown RBP20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CCDC14Q49A88 953 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 MAP9Q49MG5 647 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CLEC20AQ6ZU45 233 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CCDC105Q8IYK2 499 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 FAM193BQ96PV7 902 aaPredicted RBP20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 SLITRK1Q96PX8 696 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 RHOBTB2Q9BYZ6 727 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CHST7Q9NS84 486 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 KRT82Q9NSB4 513 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 CDH9Q9ULB4 789 aa20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 PRG3Q9Y2Y8 225 aaPredicted RBP20.15■□□□□ 0.82
TUBB4B-202ENST00000604929 DCDC2CA8MYV0 355 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 XPO1O14980 1071 aaKnown RBP20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 INPPL1O15357 1258 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 NDUFV1P49821 464 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 PPP2R5EQ16537 467 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 ABI1Q8IZP0 508 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 HSFY1Q96LI6 401 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 TMEM209Q96SK2 561 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 CNPY3Q9BT09 278 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 DPH5Q9H2P9 285 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 USP18Q9UMW8 372 aa20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 R3HDM2Q9Y2K5 976 aaKnown RBP20.14■□□□□ 0.81
TUBB4B-202ENST00000604929 M0QZQ0 153 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms