RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 SNAPC2Q13487 334 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 CUL4BQ13620 913 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 NOMO1Q15155 1222 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 TSTQ16762 297 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ZNF827Q17R98 1081 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 KHDC1LQ5JSQ8 128 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRAMEF18Q5VWM3 479 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRAMEF9Q5VWM5 478 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ACAD10Q6JQN1 1059 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PLBD1Q6P4A8 553 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 RPTNQ6XPR3 784 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ETV3LQ6ZN32 361 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 BBS12Q6ZW61 710 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ZC3H18Q86VM9 953 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PPP1R3BQ86XI6 285 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 IGDCC3Q8IVU1 814 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 RHOT1Q8IXI2 618 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 OR1N1Q8NGS0 311 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 CREB3L4Q8TEY5 395 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 KBTBD7Q8WVZ9 684 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 GAB3Q8WWW8 586 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 CLEC4DQ8WXI8 215 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ST8SIA4Q92187 359 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 RUBCNQ92622 972 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 HOXB13Q92826 284 aaPredicted RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 TRIM43Q96BQ3 446 aaPredicted RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 VMP1Q96GC9 406 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 TOE1Q96GM8 510 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 MPHOSPH8Q99549 860 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 P2RX7Q99572 595 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 BAG1Q99933 345 aaPredicted RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 C7orf25Q9BPX7 421 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 CD248Q9HCU0 757 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 NECTIN3Q9NQS3 549 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 RBM12Q9NTZ6 932 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PIH1D1Q9NWS0 290 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ISY1Q9ULR0 285 aaKnown RBP4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 USP18Q9UMW8 372 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 MYRFQ9Y2G1 1151 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 ACEP12821 1306 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 COL24A1Q17RW2 1714 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 SPATA31E1Q6ZUB1 1445 aa4.37□□□□□ -1.71
IGHV3-29-201ENST00000604817 AKAP12Q02952 1782 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 FAM171A2A8MVW0 826 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 NUDT19A8MXV4 375 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ADRB2P07550 413 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 HNRNPCP07910 306 aaKnown RBP eCLIP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLC3A2P08195 630 aaKnown RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLC6A9P48067 706 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 GPR15P49685 360 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 RGS3P49796 1198 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRR5P85299 388 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 DBPQ10586 325 aaPredicted RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 WASHC5Q12768 1159 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 BECN1Q14457 450 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 NOLC1Q14978 699 aaKnown RBP eCLIP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PSMD6Q15008 389 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 UBE3CQ15386 1083 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 MAN2A1Q16706 1144 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 VMACQ2NL98 169 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PLEKHN1Q494U1 663 aaPredicted RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ARHGAP15Q53QZ3 475 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 RRAGBQ5VZM2 374 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLFN12LQ6IEE8 588 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 FBXO38Q6PIJ6 1188 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 KRT74Q7RTS7 529 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 MICU3Q86XE3 530 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 VGLL2Q8N8G2 317 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ARRDC4Q8NCT1 418 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CCDC191Q8NCU4 936 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CALML6Q8TD86 181 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ZNF384Q8TF68 577 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 AFG1LQ8WV93 481 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ATRIPQ8WXE1 791 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CPA5Q8WXQ8 436 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 THAP4Q8WY91 577 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 COG8Q96MW5 612 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 FOXB1Q99853 325 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLF1Q9BQI6 1058 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 BDH2Q9BUT1 245 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CDK19Q9BWU1 502 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SEZ6LQ9BYH1 1024 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 OSBPL6Q9BZF3 934 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ARHGAP39Q9C0H5 1083 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PITHD1Q9GZP4 211 aaPredicted RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRDM13Q9H4Q3 707 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SARS2Q9NP81 518 aaKnown RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CNNM1Q9NRU3 951 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 ATP8A2Q9NTI2 1148 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 HAUS2Q9NVX0 235 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 TFCP2L1Q9NZI6 479 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 RGL1Q9NZL6 768 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 BTBD7Q9P203 1132 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms