RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 ARHGEF18Q6ZSZ5 1173 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FASTKD5Q7L8L6 764 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FNIP1Q8TF40 1166 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MCRS1Q96EZ8 462 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C12orf65Q9H3J6 166 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRABDQ9H4I3 376 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZNF408Q9H9D4 720 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CD248Q9HCU0 757 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SLCO1B3Q9NPD5 702 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DPP3Q9NY33 737 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GRID1Q9ULK0 1009 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ASB14A6NK59 587 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 H3BRB1 525 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HCRTO43612 131 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 OAS1P00973 400 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PDGFRAP16234 1089 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TAC1P20366 129 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CDH6P55285 790 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 BBS9Q3SYG4 887 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GLRA4Q5JXX5 417 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C3orf62Q6ZUJ4 267 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PYROXD1Q8WU10 500 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RMDN2Q96LZ7 410 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SHOC2Q9UQ13 582 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TSPAN1O60635 241 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ICE2Q659A1 982 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SPATA21Q7Z572 469 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NAT8LQ8N9F0 302 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ACAP3Q96P50 834 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KLF6Q99612 283 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAK16Q9BXY0 300 aaKnown RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FOXP3Q9BZS1 431 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ASB7Q9H672 318 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SBF1O95248 1867 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GOLGA8RI6L899 631 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 AVILO75366 819 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PFKMP08237 780 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPP1R26Q5T8A7 1209 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C9orf131Q5VYM1 1079 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PMF1Q6P1K2 205 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CYP4V2Q6ZWL3 525 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TBC1D1Q86TI0 1168 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 IGDCC3Q8IVU1 814 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LINC01465Q8N7H1 131 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FBXO36Q8NEA4 188 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TTC25Q96NG3 672 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SNX9Q9Y5X1 595 aa12.35□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SUN1O94901 812 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HMGCRP04035 888 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 VDRP11473 427 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CA4P22748 312 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TNFAIP2Q03169 654 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MGAT5Q09328 741 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SLC1A5Q15758 541 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TAZQ16635 292 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM187BQ17R55 369 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZC3H12AQ5D1E8 599 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CCDC33Q8N5R6 958 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FITM2Q8N6M3 262 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAGEB18Q96M61 343 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MRPL45Q9BRJ2 306 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CDHR5Q9HBB8 845 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NGRNQ9NPE2 291 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SETD4Q9NVD3 440 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RABGEF1Q9UJ41 708 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SLC12A4Q9UP95 1085 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 APOC4-APOC2K7ER74 178 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ASMTLO95671 621 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 APOC2P02655 101 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms