RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 EMC10Q5UCC4 262 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC39A4Q6P5W5 647 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SCN4BQ8IWT1 228 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PDCL2Q8N4E4 241 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FSIP1Q8NA03 581 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PNKPQ96T60 521 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ASB7Q9H672 318 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 DNAAF2Q9NVR5 837 aaKnown RBP12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 KCND2Q9NZV8 630 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PCDHB6Q9Y5E3 794 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ABCA7Q8IZY2 2146 aa12.64□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ACACAQ13085 2346 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TENM4Q6N022 2769 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 APODP05090 189 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 KIR2DL1P43626 348 aaPredicted RBP12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PDE6CP51160 858 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC12A3P55017 1021 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZXDBP98169 803 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ATP2C1P98194 919 aaPredicted RBP12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZNF33AQ06730 810 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 RESTQ13127 1097 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 DHCR24Q15392 516 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 C12orf40Q86WS4 652 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 NAXDQ8IW45 347 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 KCNN1Q92952 543 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ZNF560Q96MR9 790 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PKMYT1Q99640 499 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ACBD6Q9BR61 282 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SMPD4Q9NXE4 827 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 L1RE1Q9UN81 338 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TRIP11Q15643 1979 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TISP43B9A030 160 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HCRTO43612 131 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SYPP08247 313 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 EIF2DP41214 584 aaKnown RBP12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GRIA2P42262 883 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADALQ6DHV7 355 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC36A4Q6YBV0 504 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GLIS3Q8NEA6 775 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 REEP2Q9BRK0 252 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 LAD1O00515 517 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HUS1O60921 280 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GJB3O75712 270 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADH1CP00326 375 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADH5P11766 374 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 GABRG2P18507 467 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SCP2P22307 547 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PRPHP41219 470 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PNPLA4P41247 253 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ANAPC15P60006 121 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 MYL7Q01449 175 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 HYIQ5T013 277 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC41A1Q8IVJ1 513 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ADGRG2Q8IZP9 1017 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TRIML1Q8N9V2 468 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FBXO18Q8NFZ0 1043 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CFAP97Q9P2B7 532 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 AGO2Q9UKV8 859 aaKnown RBP12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 CPQQ9Y646 472 aa12.61□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TSC2P49815 1807 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 IGHV1OR15-9A0A0B4J2B8 117 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 FAM13AO94988 1023 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 POLR2BP30876 1174 aaKnown RBP12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 USP46P62068 366 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 SLC7A9P82251 487 aa12.6□□□□□ -0.39
PDLIM1P1-201ENST00000604187 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms