RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 NOP53Q9NZM5 478 aaKnown RBP5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 SNX13Q9Y5W8 968 aa5.28□□□□□ -1.56
SPTBN1-206ENST00000602898 UBE2CO00762 179 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 IFIT3O14879 490 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PRODHO43272 600 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PRPSAP2O60256 369 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TSPAN1O60635 241 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 BEST1O76090 585 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SGPL1O95470 568 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF3P17036 446 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DNM2P50570 870 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GPC3P51654 580 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 MTTPP55157 894 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GSDMDP57764 484 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PDE1BQ01064 536 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 MSLNQ13421 630 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 XRCC4Q13426 336 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 C15orf59Q2T9L4 293 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ALG11Q2TAA5 492 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.27□□□□□ -1.575e-7■□□□□ 9
SPTBN1-206ENST00000602898 LETM2Q2VYF4 491 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 HSP90AA5PQ58FG0 334 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TMEM240Q5SV17 173 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 B3GNT6Q6ZMB0 384 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KRT73Q86Y46 540 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ITPRIPQ8IWB1 547 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CDH26Q8IXH8 852 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SFRP1Q8N474 314 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF321PQ8N8H1 164 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ANKS4BQ8N8V4 417 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 OR56B2PQ8NGI1 322 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 LRFN3Q9BTN0 628 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 HGH1Q9BTY7 390 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CARD6Q9BX69 1037 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 RHBGQ9H310 441 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 C19orf44Q9H6X5 657 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DECR2Q9NUI1 292 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 AGO2Q9UKV8 859 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TRIM33Q9UPN9 1127 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TRAF3IP3Q9Y228 551 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PCDHB5Q9Y5E4 795 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SNX8Q9Y5X2 465 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TULP4Q9NRJ4 1543 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GRIN2DO15399 1336 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SBF2Q86WG5 1849 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 hCG_1809904A0A1W2PP81 198 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A1W2PPE2 198 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A1W2PR64 198 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TTLL8A6PVC2 850 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PPEF2O14830 753 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 AXIN1O15169 862 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CETN3O15182 167 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SUPT3HO75486 399 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PRDM1O75626 825 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 FKBP9O95302 570 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ATP6V1G2O95670 118 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 FTCDO95954 541 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CLTAP09496 248 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 UBL4AP11441 157 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NFKBIAP25963 317 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 RFC4P35249 363 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 BAG6P46379 1132 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ALDH3A2P51648 485 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CCR9P51686 369 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CASP5P51878 434 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KLC1Q07866 573 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 STIM1Q13586 685 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TUBA3CQ13748 450 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CASP8Q14790 479 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM110CQ1W6H9 321 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF805Q5CZA5 627 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KLHDC10Q6PID8 442 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SARM1Q6SZW1 724 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 FKBP9P1Q75LS8 142 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NLRP9Q7RTR0 991 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 IFT81Q8WYA0 676 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 UHRF1Q96T88 793 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 BPIFA3Q9BQP9 254 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 RIOK1Q9BRS2 568 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DRC3Q9H069 523 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PAIP1Q9H074 479 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 WDR6Q9NNW5 1121 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SEMA3GQ9NS98 782 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ATAD3AQ9NVI7 634 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 RHBDL2Q9NX52 303 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GMPR2Q9P2T1 348 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CHORDC1Q9UHD1 332 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC39A10Q9ULF5 831 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KIAA1217Q5T5P2 1943 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A1W2PQU0 124 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms