RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ANKS1AQ92625 1134 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 FANCEQ9HB96 536 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ALG6Q9Y672 507 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 PNPLA7Q6ZV29 1317 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MAGI3Q5TCQ9 1506 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ABCA8O94911 1581 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 GSTM1P09488 218 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 THRAP10827 490 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 NME5P56597 212 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MFSD14CQ5VZR4 134 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 YAF2Q8IY57 180 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 OMA1Q96E52 524 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 EFCAB1Q9HAE3 211 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 TMCC3Q9ULS5 477 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 FDFT1P37268 417 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 STAT5BP51692 787 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 UGT3A1Q6NUS8 523 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 CINPQ9BW66 212 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 UBE2OQ9C0C9 1292 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 UTP6Q9NYH9 597 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SPATA2Q9UM82 520 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 DNALI1O14645 258 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 MAP3K13O43283 966 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 MAPK1P28482 360 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 HDHD2Q9H0R4 259 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 RNF17Q9BXT8 1623 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 MTDHQ86UE4 582 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 KCTD14Q9BQ13 255 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TAGLN3Q9UI15 199 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PLEKP08567 350 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 STK4Q13043 487 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CDH24Q86UP0 819 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF677Q86XU0 584 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 SGF29Q96ES7 293 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PNMA8BQ9ULN7 279 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF862O60290 1169 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 HLA-DRAP01903 254 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TMEM253P0C7T8 217 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 C1DQ13901 141 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 SNX17Q15036 470 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 MRPL48Q96GC5 212 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ZSWIM1Q9BR11 485 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TMEM79Q9BSE2 394 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PMPCBO75439 489 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 BCL10O95999 233 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 FLT3P36888 993 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 EXOSC10Q01780 885 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 DENND1BQ6P3S1 775 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PHF20Q9BVI0 1012 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TDRD3Q9H7E2 651 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CRLS1Q9UJA2 301 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PRRG1O14668 218 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 RBP3P10745 1247 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ST8SIA6P61647 398 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 NEK10Q6ZWH5 1172 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ROGDIQ9GZN7 287 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 IQCA1LA6NCM1 817 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 EXTL3O43909 919 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PCSK1P29120 753 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 RASA2Q15283 850 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ALFQ53S48 1182 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CCDC126Q96EE4 140 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 NIF3L1Q9GZT8 377 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 SYNDIG1Q9H7V2 258 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 GTF2A1LQ9UNN4 478 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 SPAG17Q6Q759 2223 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 COX10Q12887 443 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TFDP3Q5H9I0 405 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 HPDLQ96IR7 371 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 RMND5AQ9H871 391 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 RXFP1Q9HBX9 757 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 TPRP12270 2363 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 MADDQ8WXG6 1647 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 SAC3D1A6NKF1 404 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CHRM3P20309 590 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CDC42EP1Q00587 391 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ATP1A4Q13733 1029 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 FAM45BPQ6NSW5 357 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 IZUMO2Q6UXV1 221 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ZBTB49Q6ZSB9 765 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 LPCAT2Q7L5N7 544 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 STKLD1Q8NE28 680 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 LRRC39Q96DD0 335 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
CSMD1-217ENST00000602723 PI4K2AQ9BTU6 479 aa9.94□□□□□ -0.82
CSMD1-217ENST00000602723 CCDC88CQ9P219 2028 aa9.93□□□□□ -0.82
CSMD1-217ENST00000602723 DYTNA2CJ06 578 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms