RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 HNRNPABQ99729 332 aaKnown RBP18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 TLR10Q9BXR5 811 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 KRT82Q9NSB4 513 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 DSEQ9UL01 958 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 GOLGA8SH3BPF8 625 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 ZMYND10O75800 440 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 MTA2O94776 668 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 SYF2O95926 243 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 FGBP02675 491 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 MYBL1P10243 752 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 MYBL2P10244 700 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 ACTN2P35609 894 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 RPL7AP62424 266 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 TCEAL1Q15170 157 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 VARS2Q5ST30 1063 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 DAB2IPQ5VWQ8 1189 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 ANKRD52Q8NB46 1076 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 SLC35F5Q8WV83 523 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 COLEC11Q9BWP8 271 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 HESX1Q9UBX0 185 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 ANAPC7Q9UJX3 599 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 EFCAB14O75071 495 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 CALB1P05937 261 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 PCSK1P29120 753 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 BCAT1P54687 386 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 HADHBP55084 474 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 BST2Q10589 180 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 BTG3Q14201 252 aaPredicted RBP18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 DAAM2Q86T65 1068 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 RUBCNQ92622 972 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 TRIM11Q96F44 468 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 OSBPL9Q96SU4 736 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 ACBD6Q9BR61 282 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 MED10Q9BTT4 135 aa18.28■□□□□ 0.52
PPFIA3-207ENST00000602716 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 EFEMP2O95967 443 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 TCP1P17987 556 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 FGFR3P22607 806 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 OGDHQ02218 1023 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 ZNF252P-AS1Q0IIN9 211 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 MESDQ14696 234 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 PPP1R15BQ5SWA1 713 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 LIN9Q5TKA1 542 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM171BQ6P995 826 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 RSPO2Q6UXX9 243 aaPredicted RBP18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 CLEC20AQ6ZU45 233 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM183BPQ6ZVS7 135 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 ZMIZ2Q8NF64 920 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 JOSD2Q8TAC2 188 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 CLEC4CQ8WTT0 213 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 VCPIP1Q96JH7 1222 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 MCEEQ96PE7 176 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 SMOQ99835 787 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 UVRAGQ9P2Y5 699 aa18.27■□□□□ 0.52
PPFIA3-207ENST00000602716 RNF40O75150 1001 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 PAX3P23760 479 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SPOUT1Q5T280 376 aaKnown RBP18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 DNAJC24Q6P3W2 148 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 KCNT2Q6UVM3 1135 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 GSPT2Q8IYD1 628 aaKnown RBP18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 CMTR2Q8IYT2 770 aaKnown RBP18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SPATA18Q8TC71 538 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 AENQ8WTP8 325 aaKnown RBP18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 YME1L1Q96TA2 773 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SELENOOQ9BVL4 669 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SLC4A5Q9BY07 1137 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SYNCQ9H7C4 482 aa18.27■□□□□ 0.51
PPFIA3-207ENST00000602716 SYN3O14994 580 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 OAZ2O95190 189 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 GJB5O95377 273 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 LINC00271P0C7V0 271 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 NPR3P17342 541 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 GABRB2P47870 512 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 MEI1Q5TIA1 1274 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 PRSS55Q6UWB4 352 aaPredicted RBP18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 GPRIN1Q7Z2K8 1008 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 NT5DC3Q86UY8 548 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 C3orf20Q8ND61 904 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 SPATA4Q8NEY3 305 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 C18orf8Q96DM3 657 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 IGSF21Q96ID5 467 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 KCNK16Q96T55 309 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 DUSP16Q9BY84 665 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 METTL5Q9NRN9 209 aaKnown RBP18.26■□□□□ 0.51
PPFIA3-207ENST00000602716 PAPSS1O43252 624 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 TRAPPC3O43617 180 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MARCKSL1P49006 195 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 ALDH7A1P49419 539 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MAP3K7CLP57077 242 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 MRPL58Q14197 206 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 TAF5Q15542 800 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 SLC39A12Q504Y0 691 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 TRNP1Q6NT89 227 aa18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-207ENST00000602716 PIGZQ86VD9 579 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms