RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	EFCAB13	Q8IY85	973 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	FRMD1	Q8N878	549 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	TMLHE	Q9NVH6	421 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	RCOR1	Q9UKL0	485 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	PCDHA7	Q9UN72	937 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	PCDHB5	Q9Y5E4	795 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	OBSL1	O75147	1896 aa		19.81	■□□□□ 0.76
LTBP4-231	ENST00000602251	PTPRD	P23468	1912 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	NFIC	P08651	508 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	USP17L7	P0C7H9	530 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	OPRD1	P41143	372 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	USP4	Q13107	963 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	SDHAF4	Q5VUM1	108 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	RAB44	Q7Z6P3	723 aa	Predicted RBP	19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	CD302	Q8IX05	232 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	DCP1B	Q8IZD4	617 aa	Known RBP	19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	PYM1	Q9BRP8	204 aa	Known RBP	19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	LRRC27	Q9C0I9	530 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	TMEM206	Q9H813	350 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	TRPC7	Q9HCX4	862 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	PILRB	Q9UKJ0	227 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	SCN1A	P35498	2009 aa		19.8	■□□□□ 0.76
LTBP4-231	ENST00000602251	ACACA	Q13085	2346 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251		K7ENM7	598 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	TRAK2	O60296	914 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	PRPF40A	O75400	957 aa	Known RBP	19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	ALDH1A2	O94788	518 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	CKM	P06732	381 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	SCP2	P22307	547 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	LIG4	P49917	911 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	TMEM132D	Q14C87	1099 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	SPDYC	Q5MJ68	293 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	SHC4	Q6S5L8	630 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	IQUB	Q8NA54	791 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	DHX58	Q96C10	678 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	PI4K2A	Q9BTU6	479 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	CUEDC2	Q9H467	287 aa		19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	UXT	Q9UBK9	157 aa	Predicted RBP	19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	CPSF3	Q9UKF6	684 aa	Known RBP	19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	CIZ1	Q9ULV3	898 aa	Predicted RBP	19.79	■□□□□ 0.76
LTBP4-231	ENST00000602251	KALRN	O60229	2985 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251		A0A087X0B3	334 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	TRAV19	A0A0A6YYK7	116 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251		A0A0B4J269	797 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	NOL4	O94818	638 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	IDE	P14735	1019 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	ABCD1	P33897	745 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	ZNF131	P52739	623 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	NCKAP1L	P55160	1127 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	MRPS21	P82921	87 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	AMPD3	Q01432	767 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	SCAP	Q12770	1279 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	DDR2	Q16832	855 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	ZNF423	Q2M1K9	1284 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	COL28A1	Q2UY09	1125 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	GAB4	Q2WGN9	574 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	PEAR1	Q5VY43	1037 aa	Predicted RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	HDDC3	Q8N4P3	179 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	SH3RF2	Q8TEC5	729 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	LEO1	Q8WVC0	666 aa	Predicted RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	KCNN1	Q92952	543 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	TRMT2B	Q96GJ1	504 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	SPACA7	Q96KW9	195 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	MYRFL	Q96LU7	910 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	SCAND2P	Q9GZW5	306 aa	Predicted RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	FSCN3	Q9NQT6	498 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	DERA	Q9Y315	318 aa		19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	TNRC6B	Q9UPQ9	1833 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-231	ENST00000602251	APC2	O95996	2303 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	ATXN2	Q99700	1313 aa	Known RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	MYMK	A6NI61	221 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	HNRNPDL	O14979	420 aa	Known RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	NFATC1	O95644	943 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	CFI	P05156	583 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	ITPKA	P23677	461 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	DPP6	P42658	865 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	TAF6	P49848	677 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	ATXN3	P54252	364 aa	Predicted RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	MAP7D1	Q3KQU3	841 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	LYSMD4	Q5XG99	296 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	ARL14EP	Q8N8R7	260 aa	Predicted RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	WHAMM	Q8TF30	809 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	GTPBP2	Q9BX10	602 aa	Known RBP	19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	GCNT4	Q9P109	453 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	SLC6A14	Q9UN76	642 aa		19.77	■□□□□ 0.76
LTBP4-231	ENST00000602251	POLR2D	O15514	142 aa	Known RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	PIGR	P01833	764 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	CHRM1	P11229	460 aa	Predicted RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	TCF3	P15923	654 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	GAP43	P17677	238 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	CYP2F1	P24903	491 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	HOXD12	P35452	270 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	ANP32A	P39687	249 aa	Known RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	RPL10A	P62906	217 aa	Known RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	NFE2	Q16621	373 aa	Predicted RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	RESP18	Q5W5W9	173 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	LMBRD2	Q68DH5	695 aa	Predicted RBP	19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	SFTPA1	Q8IWL2	248 aa		19.76	■□□□□ 0.75
LTBP4-231	ENST00000602251	ALLC	Q8N6M5	410 aa		19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms