RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 TMEM35BQ8NCS4 154 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 SMARCD1Q96GM5 515 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 PIWIL1Q96J94 861 aaKnown RBP24.24■■□□□ 1.47
IRF3-227ENST00000600911 CSNK1G1Q9HCP0 422 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 MYO16Q9Y6X6 1858 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 F8VP50 259 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 ABCB4P21439 1286 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 MAGEA1P43355 309 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 SMC1AQ14683 1233 aaKnown RBP24.23■■□□□ 1.47
IRF3-227ENST00000600911 MAPRE1Q15691 268 aaKnown RBP24.23■■□□□ 1.47
IRF3-227ENST00000600911 NFE2Q16621 373 aaPredicted RBP24.23■■□□□ 1.47
IRF3-227ENST00000600911 DDR2Q16832 855 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 LRIT3Q3SXY7 679 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 HS1BP3Q53T59 392 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 C4orf50Q6ZRC1 276 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 MCOLN2Q8IZK6 566 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 GPR152Q8TDT2 470 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 THAP2Q9H0W7 228 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 PPP2R2CQ9Y2T4 447 aa24.23■■□□□ 1.47
IRF3-227ENST00000600911 XPO1O14980 1071 aaKnown RBP24.22■■□□□ 1.47
IRF3-227ENST00000600911 TGM5O43548 720 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 GJB6O95452 261 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 MMP8P22894 467 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 NDUFV1P49821 464 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 PHF13Q86YI8 300 aaPredicted RBP24.22■■□□□ 1.47
IRF3-227ENST00000600911 MICAL1Q8TDZ2 1067 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 CLEC4CQ8WTT0 213 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 TRIM44Q96DX7 344 aaPredicted RBP24.22■■□□□ 1.47
IRF3-227ENST00000600911 OXCT2Q9BYC2 517 aaPredicted RBP24.22■■□□□ 1.47
IRF3-227ENST00000600911 TTYH1Q9H313 450 aaPredicted RBP24.22■■□□□ 1.47
IRF3-227ENST00000600911 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.22■■□□□ 1.47
IRF3-227ENST00000600911 STK39Q9UEW8 545 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 SALL4Q9UJQ4 1053 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 DUSP10Q9Y6W6 482 aa24.22■■□□□ 1.47
IRF3-227ENST00000600911 E5RJQ4 531 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 PLA2G4AP47712 749 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 SCN4BQ8IWT1 228 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 ZNF461Q8TAF7 563 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 FEZF2Q8TBJ5 459 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 NDRG1Q92597 394 aaKnown RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 FUBP3Q96I24 572 aaKnown RBP eCLIP24.21■■□□□ 1.47
IRF3-227ENST00000600911 SLC4A5Q9BY07 1137 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 ST7Q9NRC1 585 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 AFF4Q9UHB7 1163 aaKnown RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 PER2O15055 1255 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 SETSIPP0DME0 302 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 HAPLN1P10915 354 aaPredicted RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 ATF6P18850 670 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 ARHGAP25P42331 645 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 NSFP46459 744 aaKnown RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 RPL34P49207 117 aaKnown RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 LILRA6Q6PI73 481 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 REXO1L1PQ8IX06 675 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 KIAA1524Q8TCG1 905 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 SPPL2BQ8TCT7 592 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 PPP1R13BQ96KQ4 1090 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 SEPT5Q99719 369 aaPredicted RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 DNAI2Q9GZS0 605 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 ZNF576Q9H609 170 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 TRMT1Q9NXH9 659 aaKnown RBP24.21■■□□□ 1.47
IRF3-227ENST00000600911 ZKSCAN5Q9Y2L8 839 aa24.21■■□□□ 1.47
IRF3-227ENST00000600911 NRDCO43847 1150 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 ATF2P15336 505 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 RRM1P23921 792 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 GRIK1P39086 918 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 RBM10P98175 930 aaKnown RBP24.2■■□□□ 1.46
IRF3-227ENST00000600911 SPA17Q15506 151 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 MGAT5BQ3V5L5 792 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 ERICH1Q86X53 443 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 NGRNQ9NPE2 291 aaKnown RBP24.2■■□□□ 1.46
IRF3-227ENST00000600911 DMAP1Q9NPF5 467 aaPredicted RBP24.2■■□□□ 1.46
IRF3-227ENST00000600911 ADAM22Q9P0K1 906 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 CEP83Q9Y592 693 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 DOCK6Q96HP0 2047 aa24.2■■□□□ 1.46
IRF3-227ENST00000600911 TCRBV5S1A1TA0A578 114 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 TNFRSF10BO14763 440 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 H2AFZP0C0S5 128 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 LCP1P13796 627 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 VAV2P52735 878 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 H2AFVQ71UI9 128 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 XYLT1Q86Y38 959 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 SCAMP5Q8TAC9 235 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 ABCB6Q9NP58 842 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 SSX2IPQ9Y2D8 614 aa24.19■■□□□ 1.46
IRF3-227ENST00000600911 A0A1W2PPC1 479 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 PAPSS1O43252 624 aaPredicted RBP24.18■■□□□ 1.46
IRF3-227ENST00000600911 CLASP2O75122 1294 aaKnown RBP24.18■■□□□ 1.46
IRF3-227ENST00000600911 KLRC2P26717 231 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 GTF2F1P35269 517 aaKnown RBP eCLIP24.18■■□□□ 1.464e-10■■■■■ 32.8
IRF3-227ENST00000600911 MAGEA11P43364 429 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 GABRB2P47870 512 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 CLCN4P51793 760 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 ADIGQ0VDE8 80 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 MTMR3Q13615 1198 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 RAB41Q5JT25 222 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 TPGS2Q68CL5 300 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 FAM183BPQ6ZVS7 135 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 TMEM110Q86TL2 294 aa24.18■■□□□ 1.46
IRF3-227ENST00000600911 RBM23Q86U06 439 aaKnown RBP24.18■■□□□ 1.46
IRF3-227ENST00000600911 ZNF653Q96CK0 615 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms