RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 LCLAT1Q6UWP7 414 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 RSPO2Q6UXX9 243 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ZDHHC14Q8IZN3 488 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 CEP295NLQ96MC4 621 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 NECTIN4Q96NY8 510 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 KLHL5Q96PQ7 755 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 PANX2Q96RD6 677 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 HNRNPABQ99729 332 aaKnown RBP12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 SYT11Q9BT88 431 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 LIMD1Q9UGP4 676 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 NCOR2Q9Y618 2525 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 O00370 1275 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 MED7O43513 233 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 HCRTO43612 131 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 GFPT2O94808 682 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 PAPLNO95428 1278 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 ATF2P15336 505 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 CYP11B1P15538 503 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 OR1D2P34982 312 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 MTHFRP42898 656 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 MAGEA11P43364 429 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 PDE6CP51160 858 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 VSTM1Q6UX27 236 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 SLC47A2Q86VL8 602 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 ZNF606Q8WXB4 792 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 CYFIP2Q96F07 1278 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 PCED1BQ96HM7 432 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 HEXIM2Q96MH2 286 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 IRF2BPLQ9H1B7 796 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 ATP8B3O60423 1300 aa12.34□□□□□ -0.43
CHMP2A-207ENST00000600804 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 C2CD2LO14523 706 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ADAM12O43184 909 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ATP2C2O75185 946 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 SERPING1P05155 500 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 PNMA6AP0CW24 399 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 USP8P40818 1118 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 CDR2Q01850 454 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ASIC2Q16515 512 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ZNF394Q53GI3 561 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 MDH1BQ5I0G3 518 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 E4F1Q66K89 784 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 HGSNATQ68CP4 663 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 TMC5Q6UXY8 1006 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 PAQR9Q6ZVX9 377 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 TDRD5Q8NAT2 981 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ANKRD52Q8NB46 1076 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 CPLX3Q8WVH0 158 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 TFAP2BQ92481 460 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 TMEM209Q96SK2 561 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 LHX5Q9H2C1 402 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 CSNK1G1Q9HCP0 422 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 PNPLA8Q9NP80 782 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 DPP7Q9UHL4 492 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 PCDHB5Q9Y5E4 795 aa12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 KMT2BQ9UMN6 2715 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-207ENST00000600804 VNN2O95498 520 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 LSM8O95777 96 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 POU2F2P09086 479 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 CPB1P15086 417 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 CD19P15391 556 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 CDH5P33151 784 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms