RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 DENND4AQ7Z401 1863 aa15.07■□□□□ 0
SHKBP1-217ENST00000598558 TNFRSF10AO00220 468 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 DLL1O00548 723 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 TRIM66O15016 1216 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 EPHB6O15197 1021 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 TEX33O43247 280 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 FCARP24071 287 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 HTR4Q13639 388 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 ARHGAP44Q17R89 818 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 FAM78AQ5JUQ0 283 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 KLHDC7AQ5VTJ3 777 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 TANGO2Q6ICL3 276 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 TTC39CQ8N584 583 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 LEMD2Q8NC56 503 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 RSPRY1Q96DX4 576 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 TRMT2BQ96GJ1 504 aaKnown RBP15.06■□□□□ 0
SHKBP1-217ENST00000598558 SMARCD1Q96GM5 515 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 NAP1L5Q96NT1 182 aaPredicted RBP15.06■□□□□ 0
SHKBP1-217ENST00000598558 TTLL2Q9BWV7 592 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 LSM14BQ9BX40 385 aaKnown RBP15.06■□□□□ 0
SHKBP1-217ENST00000598558 NAA15Q9BXJ9 866 aaKnown RBP15.06■□□□□ 0
SHKBP1-217ENST00000598558 SLC46A2Q9BY10 475 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 GPR88Q9GZN0 384 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 FAM124BQ9H5Z6 455 aaPredicted RBP15.06■□□□□ 0
SHKBP1-217ENST00000598558 EPHX3Q9H6B9 360 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 IL37Q9NZH6 218 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 SIK3Q9Y2K2 1263 aa15.06■□□□□ 0
SHKBP1-217ENST00000598558 SMTNL1A8MU46 457 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 LGALS16A8MUM7 142 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 O00370 1275 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 FOXN3O00409 490 aaPredicted RBP15.05■□□□□ -0
SHKBP1-217ENST00000598558 GABBR2O75899 941 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 CFHP08603 1231 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 FAM200BP0CF97 657 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 VDRP11473 427 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 CD19P15391 556 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
SHKBP1-217ENST00000598558 BRD2P25440 801 aaKnown RBP15.05■□□□□ -0
SHKBP1-217ENST00000598558 YWHAEP62258 255 aaKnown RBP15.05■□□□□ -0
SHKBP1-217ENST00000598558 TAF12Q16514 161 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 PKDCCQ504Y2 493 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 GPR158Q5T848 1215 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 TXNDC8Q6A555 127 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 DENND5BQ6ZUT9 1274 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 SLC44A3Q8N4M1 653 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 UBA3Q8TBC4 463 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 SHC3Q92529 594 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 JAKMIP2Q96AA8 810 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 LRRC3BQ96PB8 259 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 DUSP16Q9BY84 665 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 GANQ9H2C0 597 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 DMAP1Q9NPF5 467 aaPredicted RBP15.05■□□□□ -0
SHKBP1-217ENST00000598558 GDE1Q9NZC3 331 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 FHOD1Q9Y613 1164 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 NUMBLQ9Y6R0 609 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 TTC28Q96AY4 2481 aa15.05■□□□□ -0
SHKBP1-217ENST00000598558 NARSO43776 548 aaKnown RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 PAEPP09466 180 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 ANXA13P27216 316 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 VIPR2P41587 438 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 SLC5A3P53794 718 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 MFAP3P55082 362 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 IFRD2Q12894 506 aaPredicted RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 TAF10Q12962 218 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 GOLGA7BQ2TAP0 167 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 SGO2Q562F6 1265 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 NUP93Q8N1F7 819 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 ANKRD52Q8NB46 1076 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 ASB16Q96NS5 453 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 SLC22A12Q96S37 553 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 CYP2S1Q96SQ9 504 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 KXD1Q9BQD3 176 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 SMG9Q9H0W8 520 aaKnown RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 CHORDC1Q9UHD1 332 aaPredicted RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 TSPAN16Q9UKR8 245 aa15.04■□□□□ -0
SHKBP1-217ENST00000598558 ZFP37Q9Y6Q3 630 aaPredicted RBP15.04■□□□□ -0
SHKBP1-217ENST00000598558 ATP8B3O60423 1300 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 FAM92AA1XBS5 289 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 C2orf78A6NCI8 922 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 PRAMEF12O95522 483 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 KRT5P13647 590 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 NPR3P17342 541 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 CDC25CP30307 473 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 CLCN1P35523 988 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 PDE4CQ08493 712 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 SYCP1Q15431 976 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 CNGA2Q16280 664 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 LRSAM1Q6UWE0 723 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 LCLAT1Q6UWP7 414 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 ENOSF1Q7L5Y1 443 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 RIN3Q8TB24 985 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 CEP295NLQ96MC4 621 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 TASP1Q9H6P5 420 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 PLCB1Q9NQ66 1216 aa15.03■□□□□ -0
SHKBP1-217ENST00000598558 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
SHKBP1-217ENST00000598558 KIAA1257Q9ULG3 409 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms