RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 DNMT3BQ9UBC3 853 aaKnown RBP15.2■□□□□ 0.02
VRK3-213ENST00000597215 CDH22Q9UJ99 828 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 MYO6Q9UM54 1294 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 DOCK6Q96HP0 2047 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 DENND4AQ7Z401 1863 aa15.2■□□□□ 0.02
VRK3-213ENST00000597215 GREB1Q4ZG55 1949 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 SLC38A8A6NNN8 435 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 M0QYV0 167 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 BEST1O76090 585 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 GFPT2O94808 682 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 MICAL2O94851 1124 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 FGF19O95750 216 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 CALCAP01258 141 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 SETSIPP0DME0 302 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 PDE6CP51160 858 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 EPHA5P54756 1037 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 BST2Q10589 180 aaKnown RBP15.19■□□□□ 0.02
VRK3-213ENST00000597215 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
VRK3-213ENST00000597215 MEA1Q16626 185 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 PDZD4Q76G19 769 aaPredicted RBP15.19■□□□□ 0.02
VRK3-213ENST00000597215 SLC47A2Q86VL8 602 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 TTC30AQ86WT1 665 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 ZMIZ2Q8NF64 920 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 ZNF606Q8WXB4 792 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 ZSWIM1Q9BR11 485 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 TTYH3Q9C0H2 523 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 POMKQ9H5K3 350 aa15.19■□□□□ 0.02
VRK3-213ENST00000597215 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
VRK3-213ENST00000597215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
VRK3-213ENST00000597215 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
VRK3-213ENST00000597215 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 A0A1W2PQJ5 194 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 ZNF197O14709 1029 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 RTN3O95197 1032 aaPredicted RBP15.18■□□□□ 0.02
VRK3-213ENST00000597215 CCDC172P0C7W6 258 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 HMGA1P17096 107 aaKnown RBP15.18■□□□□ 0.02
VRK3-213ENST00000597215 FSHRP23945 695 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 SLC5A3P53794 718 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 NTHL1P78549 312 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 SPECC1LQ69YQ0 1117 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 TMC8Q8IU68 726 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 HS6ST3Q8IZP7 471 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 NUP93Q8N1F7 819 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 STKLD1Q8NE28 680 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 BAP1Q92560 729 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 TRMT2BQ96GJ1 504 aaKnown RBP15.18■□□□□ 0.02
VRK3-213ENST00000597215 UBXN6Q9BZV1 441 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 ACP6Q9NPH0 428 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 COMMD8Q9NX08 183 aa15.18■□□□□ 0.02
VRK3-213ENST00000597215 MAGED2Q9UNF1 606 aaPredicted RBP15.18■□□□□ 0.02
VRK3-213ENST00000597215 ZNF638Q14966 1978 aaKnown RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 TNFRSF10BO14763 440 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 AP5Z1O43299 807 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 MYL4P12829 197 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 CYP11B1P15538 503 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 FERP16591 822 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 CDC25CP30307 473 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 KRT9P35527 623 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 KCNQ1P51787 676 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 PDE4CQ08493 712 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 TRIM14Q14142 442 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 MYRFLQ96LU7 910 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 GCNAQ96QF7 691 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 TTLL2Q9BWV7 592 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 LRRC3Q9BY71 257 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 ZNF334Q9HCZ1 680 aaPredicted RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 PCDHGC3Q9UN70 934 aa15.17■□□□□ 0.02
VRK3-213ENST00000597215 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
VRK3-213ENST00000597215 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 HHLA1C9JL84 531 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 IL9P15248 144 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 YWHAQP27348 245 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 GABRR2P28476 465 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
VRK3-213ENST00000597215 PLA2G4AP47712 749 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 PRSS36Q5K4E3 855 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 GET4Q7L5D6 327 aaPredicted RBP15.16■□□□□ 0.02
VRK3-213ENST00000597215 PIGZQ86VD9 579 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 EPS8L1Q8TE68 723 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 SECISBP2LQ93073 1101 aaKnown RBP15.16■□□□□ 0.02
VRK3-213ENST00000597215 ASB2Q96Q27 587 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 NUCKS1Q9H1E3 243 aaKnown RBP15.16■□□□□ 0.02
VRK3-213ENST00000597215 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 FBXO44Q9H4M3 255 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 IL21Q9HBE4 155 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 CEP83Q9Y592 693 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms