RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CPT1BQ92523 772 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 EMID1Q96A84 441 aaPredicted RBP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 FAXDC2Q96IV6 333 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 FAM49AQ9H0Q0 323 aaPredicted RBP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 KIF9Q9HAQ2 790 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 SETD4Q9NVD3 440 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 SHOC2Q9UQ13 582 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 EFR3BQ9Y2G0 817 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 C2CD2Q9Y426 696 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 TCRBV7S3A2A0A539 114 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 PIAS1O75925 651 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 RPL22P35268 128 aaKnown RBP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 ZKSCAN8Q15776 578 aaPredicted RBP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 MSS51Q4VC12 460 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 CNPY4Q8N129 248 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 FAM71DQ8N9W8 422 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 CMASQ8NFW8 434 aaPredicted RBP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 RSAD2Q8WXG1 361 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.79■■□□□ 1.4
SRRM1-222ENST00000596378 HES2Q9Y543 173 aa23.79■■□□□ 1.4
SRRM1-222ENST00000596378 SPAG7O75391 227 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 MMP3P08254 477 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 GOLGA7BQ2TAP0 167 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 FNBP1LQ5T0N5 605 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CEP128Q6ZU80 1094 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CYP4V2Q6ZWL3 525 aaPredicted RBP23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CENPUQ71F23 418 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 DPP9Q86TI2 863 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 ANKS4BQ8N8V4 417 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 RXFP2Q8WXD0 754 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 MS4A4AQ96JQ5 239 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 ZMAT2Q96NC0 199 aaKnown RBP23.78■■□□□ 1.4
SRRM1-222ENST00000596378 MRPL45Q9BRJ2 306 aaKnown RBP23.78■■□□□ 1.4
SRRM1-222ENST00000596378 SNTG2Q9NY99 539 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CCL15-CCL14A0A0B4J2E2 113 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 ALOX15BO15296 676 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 GPD1P21695 349 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 ZNF143P52747 638 aaPredicted RBP23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CCL15Q16663 113 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 NUGGCQ68CJ6 796 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CKAP2Q8WWK9 683 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 TTC25Q96NG3 672 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 LPIN3Q9BQK8 851 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 SYT17Q9BSW7 474 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 NT5C1AQ9BXI3 368 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 NSRP1Q9H0G5 558 aaKnown RBP23.78■■□□□ 1.4
SRRM1-222ENST00000596378 FAM49BQ9NUQ9 324 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 ASNSD1Q9NWL6 643 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 NME7Q9Y5B8 376 aa23.78■■□□□ 1.4
SRRM1-222ENST00000596378 CCT8L1PA6NM43 557 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 PDGFRAP16234 1089 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 SCTRP47872 440 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 EIF3EP60228 445 aaKnown RBP23.77■■□□□ 1.4
SRRM1-222ENST00000596378 HIF1AQ16665 826 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 GLRA4Q5JXX5 417 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 PPP1R26Q5T8A7 1209 aaPredicted RBP23.77■■□□□ 1.4
SRRM1-222ENST00000596378 LCLAT1Q6UWP7 414 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 TTC13Q8NBP0 860 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 CDHR5Q9HBB8 845 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 TUBGCP4Q9UGJ1 667 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 GGT7Q9UJ14 662 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 SNX9Q9Y5X1 595 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 C2CD4BA6NLJ0 364 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 STX2P32856 288 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 CDH6P55285 790 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 GPX6P59796 221 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 ATP11AP98196 1134 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 PKN2Q16513 984 aaKnown RBP23.77■■□□□ 1.4
SRRM1-222ENST00000596378 SYCP2LQ5T4T6 812 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 GPR142Q7Z601 462 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 ACOT1Q86TX2 421 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 OR6J1Q8NGC5 347 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 BRI3BPQ8WY22 251 aa23.77■■□□□ 1.4
SRRM1-222ENST00000596378 WDR83Q9BRX9 315 aaKnown RBP23.77■■□□□ 1.4
SRRM1-222ENST00000596378 EIF2AQ9BY44 585 aaKnown RBP23.77■■□□□ 1.4
SRRM1-222ENST00000596378 CLUHO75153 1309 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 SNX3O60493 162 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 TMEM63AO94886 807 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 GRM5P41594 1212 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 ITIH4Q14624 930 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 EFTUD2Q15029 972 aaKnown RBP eCLIP23.76■■□□□ 1.392e-8■■■■■ 57.6
SRRM1-222ENST00000596378 TRABD2AQ86V40 505 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 ZC3H18Q86VM9 953 aaKnown RBP23.76■■□□□ 1.39
SRRM1-222ENST00000596378 PPIL6Q8IXY8 311 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 SPATA18Q8TC71 538 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 C18orf25Q96B23 403 aaPredicted RBP23.76■■□□□ 1.39
SRRM1-222ENST00000596378 GPATCH2LQ9NWQ4 482 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 APOC4-APOC2K7ER74 178 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 HCRTO43612 131 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 APOC2P02655 101 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 RBP3P10745 1247 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 SSTR1P30872 391 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 HOXA11P31270 313 aaPredicted RBP23.76■■□□□ 1.39
SRRM1-222ENST00000596378 KYAT1Q16773 422 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 PMF1Q6P1K2 205 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 TTC30AQ86WT1 665 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 NAT8LQ8N9F0 302 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 MAML3Q96JK9 1138 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 TGS1Q96RS0 853 aaKnown RBP23.76■■□□□ 1.39
SRRM1-222ENST00000596378 ACTR5Q9H9F9 607 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms