RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MXRA7P84157 204 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZNF200P98182 395 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 GAD2Q05329 585 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 BAATQ14032 418 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 GSTA3Q16772 222 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 MTERF2Q49AM1 385 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 LRRC74BQ6ZQY2 392 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 LRRC6Q86X45 466 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 RAB3IL1Q8TBN0 382 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
VRK3-209ENST00000594948 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 YIPF3Q9GZM5 350 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 CISHQ9NSE2 258 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.85□□□□□ -0.19
VRK3-209ENST00000594948 TAS2R1Q9NYW7 299 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 ZNF180Q9UJW8 692 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 TEX264Q9Y6I9 313 aa13.85□□□□□ -0.19
VRK3-209ENST00000594948 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 LRCH4O75427 683 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 ATG7O95352 703 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 INHBAP08476 426 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 STIP1P31948 543 aaKnown RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 RFC5P40937 340 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 OVGP1Q12889 678 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 DPYSL3Q14195 570 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 TBCCQ15814 346 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 ZBTB41Q5SVQ8 909 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 TMEM154Q6P9G4 183 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 CMASQ8NFW8 434 aaPredicted RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 ZFAND2BQ8WV99 257 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 STMN2Q93045 179 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 TRAPPC9Q96Q05 1148 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 TARS2Q9BW92 718 aaKnown RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 DNAJB4Q9UDY4 337 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
VRK3-209ENST00000594948 MAFBQ9Y5Q3 323 aaPredicted RBP13.84□□□□□ -0.19
VRK3-209ENST00000594948 VWA5AO00534 786 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 FCHO1O14526 889 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MCF2LO15068 1137 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CHADO15335 359 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MED7O43513 233 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 RGS20O76081 388 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 OATP04181 439 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 KRT3P12035 628 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CCNFP41002 786 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 SERPINB4P48594 390 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 TTC39BQ5VTQ0 682 aaPredicted RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 RINLQ6ZS11 566 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 TMPRSS6Q8IU80 811 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 UNC45BQ8IWX7 931 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CEP120Q8N960 986 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 ACSF2Q96CM8 615 aaPredicted RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 SERAC1Q96JX3 654 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 TSC22D3Q99576 134 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 RSAD1Q9HA92 442 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 FBXO40Q9UH90 709 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 SCOCQ9UIL1 159 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 ANGPTL2Q9UKU9 493 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MGAMO43451 1857 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 TCRBV7S3A2A0A539 114 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 GOLGA8RI6L899 631 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CAPN9O14815 690 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 KRT36O76013 467 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 PDHA1P08559 390 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 ELK3P41970 407 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 KCNJ11Q14654 390 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 DBN1Q16643 649 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 ATG16L1Q676U5 607 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 NET1Q7Z628 596 aaPredicted RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 SLC26A11Q86WA9 606 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MFN1Q8IWA4 741 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 ARFGAP1Q8N6T3 406 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 AGBL3Q8NEM8 1001 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 SCG3Q8WXD2 468 aaKnown RBP13.83□□□□□ -0.2
VRK3-209ENST00000594948 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 CCDC28BQ9BUN5 200 aa13.83□□□□□ -0.2
VRK3-209ENST00000594948 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 CAPN14A8MX76 684 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms