RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 GUF1Q8N442 669 aaKnown RBP25■■□□□ 1.59
LSM4-204ENST00000594828 SPEM1Q8N4L4 309 aa25■■□□□ 1.59
LSM4-204ENST00000594828 TTC16Q8NEE8 873 aa25■■□□□ 1.59
LSM4-204ENST00000594828 ELMO3Q96BJ8 720 aa25■■□□□ 1.59
LSM4-204ENST00000594828 TTLL2Q9BWV7 592 aa25■■□□□ 1.59
LSM4-204ENST00000594828 ZNF518BQ9C0D4 1074 aa25■■□□□ 1.59
LSM4-204ENST00000594828 TRPM5Q9NZQ8 1165 aa25■■□□□ 1.59
LSM4-204ENST00000594828 GCNT4Q9P109 453 aa25■■□□□ 1.59
LSM4-204ENST00000594828 ZNF638Q14966 1978 aaKnown RBP25■■□□□ 1.59
LSM4-204ENST00000594828 CLDN5O00501 218 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 P4HA1P13674 534 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 RAP1GAPP47736 663 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 PDE6CP51160 858 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 NRLP54845 237 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 MTF1Q14872 753 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 PDGFRLQ15198 375 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 NFIL3Q16649 462 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 SCARA5Q6ZMJ2 495 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 SUMF1Q8NBK3 374 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 TNIP3Q96KP6 325 aa24.99■■□□□ 1.59
LSM4-204ENST00000594828 OTOL1A6NHN0 477 aaPredicted RBP24.98■■□□□ 1.59
LSM4-204ENST00000594828 LILRB5O75023 590 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 ARSAP15289 507 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 RPL13P26373 211 aaKnown RBP24.98■■□□□ 1.59
LSM4-204ENST00000594828 PPP3CCP48454 512 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 VAMP7P51809 220 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 CACNA2D1P54289 1103 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 AMPD2Q01433 879 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 SATB1Q01826 763 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 CCINQ13939 588 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 ZNF77Q15935 545 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 SYNPOQ8N3V7 929 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 TAF4BQ92750 862 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 HINFPQ9BQA5 517 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 SDCBP2Q9H190 292 aa24.98■■□□□ 1.59
LSM4-204ENST00000594828 DUS2Q9NX74 493 aaKnown RBP24.98■■□□□ 1.59
LSM4-204ENST00000594828 PTPRDP23468 1912 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 GREB1Q4ZG55 1949 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 AKAP3O75969 853 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 TDGF1P13385 188 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 PFKLP17858 780 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 C1orf220Q5T0J3 134 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 Q6ZS52 159 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 INTS8Q75QN2 995 aaKnown RBP24.97■■□□□ 1.59
LSM4-204ENST00000594828 SH3RF2Q8TEC5 729 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 OSCP1Q8WVF1 389 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 RUBCNQ92622 972 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 MED10Q9BTT4 135 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 TMEM30AQ9NV96 361 aa24.97■■□□□ 1.59
LSM4-204ENST00000594828 PTPRZ1P23471 2315 aaPredicted RBP24.97■■□□□ 1.59
LSM4-204ENST00000594828 KIF26AQ9ULI4 1882 aaPredicted RBP24.96■■□□□ 1.59
LSM4-204ENST00000594828 ATP8B3O60423 1300 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 ZNF840PA6NDX5 716 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 GOLGA6L4A6NEF3 574 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 KRT13P13646 458 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 NUCB2P80303 420 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 TAF10Q12962 218 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 USP4Q13107 963 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 ADAM9Q13443 819 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 NUP93Q8N1F7 819 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 ARHGAP26Q9UNA1 814 aa24.96■■□□□ 1.59
LSM4-204ENST00000594828 TRDMT1O14717 391 aaKnown RBP24.95■■□□□ 1.58
LSM4-204ENST00000594828 ABL1P00519 1130 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 ASS1P00966 412 aaKnown RBP24.95■■□□□ 1.58
LSM4-204ENST00000594828 HLA-DRAP01903 254 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 PSMC2P35998 433 aaKnown RBP24.95■■□□□ 1.58
LSM4-204ENST00000594828 PIK3CAP42336 1068 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 IFNAR2P48551 515 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 GRSF1Q12849 480 aaKnown RBP eCLIP24.95■■□□□ 1.58
LSM4-204ENST00000594828 IFRD2Q12894 506 aaPredicted RBP24.95■■□□□ 1.58
LSM4-204ENST00000594828 TMEM196Q5HYL7 178 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 ACOT1Q86TX2 421 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 FAM186BQ8IYM0 893 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 CPA6Q8N4T0 437 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 SLITRK1Q96PX8 696 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 KCNK16Q96T55 309 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 ECT2Q9H8V3 914 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 WNT6Q9Y6F9 365 aa24.95■■□□□ 1.58
LSM4-204ENST00000594828 ANAPC1Q9H1A4 1944 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 TCF3P15923 654 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 GCLMP48507 274 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 ENPEPQ07075 957 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 PNOCQ13519 176 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 SPOPLQ6IQ16 392 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 PAQR9Q6ZVX9 377 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 FAM35AQ86V20 835 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 FMR1NBQ8N0W7 255 aaPredicted RBP24.94■■□□□ 1.58
LSM4-204ENST00000594828 ATP2A3Q93084 1043 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 CHFRQ96EP1 664 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 EPC1Q9H2F5 836 aa24.94■■□□□ 1.58
LSM4-204ENST00000594828 RIF1Q5UIP0 2472 aaKnown RBP24.93■■□□□ 1.58
LSM4-204ENST00000594828 RTN3O95197 1032 aaPredicted RBP24.93■■□□□ 1.58
LSM4-204ENST00000594828 TRIM49P0CI25 452 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 TRIM49CP0CI26 452 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 YWHAQP27348 245 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 GJA4P35212 333 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 NDST1P52848 882 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 PPP3CAQ08209 521 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 EML3Q32P44 896 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 ZCWPW2Q504Y3 356 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms