RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 ANGPT1Q15389 498 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 CBWD6Q4V339 395 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 ARHGAP29Q52LW3 1261 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 CBWD3Q5JTY5 395 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 CBWD5Q5RIA9 395 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 FAM35AQ86V20 835 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 UNC93AQ86WB7 457 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 ARL14EPQ8N8R7 260 aaPredicted RBP15.68■□□□□ 0.1
USE1-205ENST00000594724 CCDC150Q8NCX0 1101 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 TTC16Q8NEE8 873 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 TATDN2Q93075 761 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 CEP295NLQ96MC4 621 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 TWNKQ96RR1 684 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 TTLL2Q9BWV7 592 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 NIF3L1Q9GZT8 377 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 CYP3A43Q9HB55 503 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 GKN1Q9NS71 199 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 FAM49BQ9NUQ9 324 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 RAB20Q9NX57 234 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 GTSE1Q9NYZ3 720 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 TRPM5Q9NZQ8 1165 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 ARMCX3Q9UH62 379 aaPredicted RBP15.68■□□□□ 0.1
USE1-205ENST00000594724 MUC6Q6W4X9 2439 aa15.68■□□□□ 0.1
USE1-205ENST00000594724 PTPRDP23468 1912 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 SOBPA7XYQ1 873 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 MAN2B1O00754 1011 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 AP1G2O75843 785 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 PPP1R2P41236 205 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 KPNA1P52294 538 aaPredicted RBP15.67■□□□□ 0.1
USE1-205ENST00000594724 STX17P56962 302 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 TNK2Q07912 1038 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 TAF10Q12962 218 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 ALYREFQ86V81 257 aaKnown RBP15.67■□□□□ 0.1
USE1-205ENST00000594724 NUP93Q8N1F7 819 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 RIN3Q8TB24 985 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 SLC2A14Q8TDB8 520 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 WHAMMQ8TF30 809 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 FAM3CQ92520 227 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 NELL2Q99435 816 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 OSBPL6Q9BZF3 934 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 IRF2BPLQ9H1B7 796 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 THG1LQ9NWX6 298 aaKnown RBP15.67■□□□□ 0.1
USE1-205ENST00000594724 GCNT4Q9P109 453 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 CTNND2Q9UQB3 1225 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 MRPS17Q9Y2R5 130 aaKnown RBP15.67■□□□□ 0.1
USE1-205ENST00000594724 NUP210Q8TEM1 1887 aaPredicted RBP15.67■□□□□ 0.1
USE1-205ENST00000594724 ATP8B3O60423 1300 aa15.67■□□□□ 0.1
USE1-205ENST00000594724 DENND4CQ5VZ89 1909 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 TICRRQ7Z2Z1 1910 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 OBSL1O75147 1896 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 TRAV19A0A0A6YYK7 116 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 BEST1O76090 585 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 ABL1P00519 1130 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 CKMP06732 381 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 USP17L7P0C7H9 530 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 HDCP19113 662 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 ADORA2BP29275 332 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 INCA1Q0VD86 236 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 FZD5Q13467 585 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 CCDC40Q4G0X9 1142 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 ZNF394Q53GI3 561 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 WDR44Q5JSH3 913 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 TRIM68Q6AZZ1 485 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 FILIP1Q7Z7B0 1213 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 ZMIZ2Q8NF64 920 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 SCAMP5Q8TAC9 235 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 SLC35C1Q96A29 364 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 SMARCD1Q96GM5 515 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 CEP63Q96MT8 703 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 SMOQ99835 787 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 NT5C1AQ9BXI3 368 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 KRT82Q9NSB4 513 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 EHD2Q9NZN4 543 aa15.66■□□□□ 0.1
USE1-205ENST00000594724 COL4A2P08572 1712 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 GREB1Q4ZG55 1949 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 ZNF840PA6NDX5 716 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 TNFRSF10BO14763 440 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 NCAM2O15394 837 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 CILPO75339 1184 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 YWHAQP27348 245 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
USE1-205ENST00000594724 MRE11P49959 708 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 MAP3K7CLP57077 242 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 ZNF268Q14587 947 aaPredicted RBP15.65■□□□□ 0.1
USE1-205ENST00000594724 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 C1orf210Q8IVY1 113 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 ZNF687Q8N1G0 1237 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 CLDN23Q96B33 292 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 CYFIP2Q96F07 1278 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 ARID3AQ99856 593 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 FAM83CQ9BQN1 747 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 EBF3Q9H4W6 596 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 C8orf33Q9H7E9 229 aaPredicted RBP15.65■□□□□ 0.1
USE1-205ENST00000594724 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 METTL14Q9HCE5 456 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms